Streptomyces sp. YIM 121038: C9F11_06565
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Entry
C9F11_06565 CDS
T11066
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_06565 (sbcD)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9F11_06565 (sbcD)
Archaeal homologous recombinant proteins
C9F11_06565 (sbcD)
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Paralog
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
DUF8755
Motif
Other DBs
NCBI-ProteinID:
QCX75013
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Position
complement(1700178..1701344)
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AA seq
388 aa
AA seq
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MRLLHTSDWHLGRALHRVSMLDAQAAFVGHLVATIREHAVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLIDRAGIHLRTDPAGVGEPVVLADA
HGDVAFYGLPYLEPALVKDEFGVERAGHEAVLGAAMDRVRADLAARPAGTRSVVLAHAFV
TGGEISDSERDITVGGVASVPSAVFAGVDYVALGHLHGSQIIDERVRYSGSPLAYSFSEA
DHRKSMWLVELDAAGGLSTAERVDCPVPRPLARVRGDLQDLLADPDLARHEDAWIEATLT
DPVRPDEPMARLCERFPHTLSLVFDPARAPEEPGVSYARRLKDRTDQQIAEDFVTHVRGA
GPDDRERTVLRDAFDAVRADDVLREVAG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctgcacacttccgactggcatctcggccgggccctgcaccgggtgagcatg
ctcgacgcgcaggccgcgttcgtcggccatctcgtcgccaccatccgcgagcacgcggtg
gacgccgtcgtcgtgtcgggagacgtgtacgaccgggcggtgcccccgctcgccgccgtc
gagctgttcgacgacgccctgcaccgcctcgccgacctcggcgtgcccacggtcatgatc
tccgggaaccacgactcggcgcggcgcctcggcgtcggcgccggactcatcgaccgtgcg
ggcatccatctgcgcaccgacccggccggcgtcggcgagcccgtggtgctcgccgacgcc
cacggggacgtggccttctacggcctgccgtatctggagcccgccctcgtgaaggacgag
ttcggcgtcgagcgcgccggacacgaggcggtgctcggcgccgccatggaccgggtgcgg
gccgacctggccgcccggcccgcaggcacccgctccgtcgtcctcgcccacgccttcgtg
accggcggcgagatcagcgacagcgagcgggacatcaccgtcggcggcgtcgcctccgtg
ccctccgccgtcttcgcgggcgtcgactacgtggccctcggccatctgcacggcagccag
atcatcgacgagcgcgtccgctacagcggctccccgctggcgtactccttctccgaggcc
gaccaccgcaagagcatgtggctcgtcgagctcgacgcggcgggcgggctgagcaccgcc
gagcgcgtcgactgcccggtgccccggcccctcgcccgcgtcaggggcgacctccaggac
ctcctcgccgacccggacctcgcccggcacgaggacgcctggatcgaggcgaccctcacc
gaccccgtgcgtccggacgagccgatggcccgcctctgcgagcgcttcccgcacaccctc
agcctcgtcttcgacccggcccgcgcccccgaggaacccggtgtgtcgtacgcgcggcgc
ctcaaggaccgcaccgaccagcagatcgcggaggacttcgtgacccatgtgcgcggcgcg
ggccccgacgaccgggagcggaccgtgctgcgggacgcgttcgacgccgtacgcgccgac
gacgtgctgcgcgaggtggccggatga
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