Streptomyces sp. YIM 121038: C9F11_10020
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Entry
C9F11_10020 CDS
T11066
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi03030
DNA replication
styi03430
Mismatch repair
styi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C9F11_10020 (dnaQ)
03430 Mismatch repair
C9F11_10020 (dnaQ)
03440 Homologous recombination
C9F11_10020 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
styi03032
]
C9F11_10020 (dnaQ)
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_10020 (dnaQ)
Enzymes [BR:
styi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C9F11_10020 (dnaQ)
DNA replication proteins [BR:
styi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C9F11_10020 (dnaQ)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C9F11_10020 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
PTCB-BRCT
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QCX75687
LinkDB
All DBs
Position
2469247..2470290
Genome browser
AA seq
347 aa
AA seq
DB search
MLEDRTLAASADSWPTAYPSRYAVVDVETTGLSKDDRIISAAVYRLDARGEVEDHWYTLV
NPQRDPGPVWIHGLTSDQLAGAPLFADIAEEFGERLRDRVLVAHNAVFDWSMIAREYARA
ERTAPVRQRLCTIALSKELGLPLPNHKLESLAAHFGVVQRHAHHALDDARVLAEAFRPSL
RAAASDGVRLPLLECRPLTEWADGAARIGRQATGSPASESAYRAQSWRASRKRPACPYPN
PGRYEPGEPLKQGMRVAFSGDTSVDRELLEDRAFDAGLHIATSVSRLTSLLVTNDPDSGT
SKTTKARSFGTPVIDEAAFGQLLQDVAPADGTAAGAARRAQPPASDG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgcacgctcgccgcgtccgcagactcctggccgaccgcctacccgtcg
aggtacgcggtcgtcgacgtggagaccacagggctgtccaaggacgaccggatcatctcc
gccgcggtctaccgtctcgacgcccgcggcgaggtcgaggaccactggtacacgctggtg
aacccgcagcgcgacccgggcccggtgtggatccacggcctgacgagcgaccagctcgcc
ggcgccccgctcttcgcggacatcgccgaggagttcggcgagcgcctgcgcgaccgcgtc
ctcgtcgcgcacaacgcggtcttcgactggtccatgatcgccagggagtacgcgcgcgcg
gagcgcaccgcgccggtccgccagcgcctgtgcaccatcgcgctctccaaggagctcggc
ctgccgctgcccaaccacaagctggagtcgctcgccgcgcacttcggcgtggtccagcgg
cacgcgcaccacgccctggacgacgcgcgcgtcctcgccgaggcgttccgcccgagcctg
cgcgcggccgcgagcgacggcgtgcggctgccgctcctggagtgccgcccgctgaccgag
tgggccgacggcgcggcccgcatcggccgccaggccaccggctccccggcgtccgagtcc
gcgtaccgcgcgcagagttggcgcgcctcccgcaagcgccccgcctgcccctacccgaac
ccggggcggtacgagccgggcgagcccctcaagcagggcatgcgcgtcgccttctccggc
gacacctccgtggaccgcgagctcctggaggaccgcgccttcgacgcgggcctgcacatc
gcgacgagcgtgtcccggctcacgagcctgctcgtcacgaacgacccggactcgggcacg
tccaagacgacgaaggcgcggtcgttcggcaccccggtcatcgacgaggcggccttcggc
cagctcctccaggacgtggccccggccgacggcacggccgcgggcgccgcccgccgcgct
cagcccccggcgtcagacgggtga
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