Streptomyces sp. YIM 121038: C9F11_12845
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Entry
C9F11_12845 CDS
T11066
Symbol
wapA
Name
(GenBank) tRNA nuclease WapA precursor
Organism
styi Streptomyces sp. YIM 121038
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Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
RHS_repeat
DUF6443
Big_13
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QCX76246
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All DBs
Position
complement(3074716..3081078)
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AA seq
2120 aa
AA seq
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MHHRSEHAPVPEDTGYRRRRRFGDGPAPKSLATGLALLMAVSCLYGAEAATAAPAEPTAG
KAAKPVATTAADLASARVAARLHGKRIEALAERTETSTTWANPNGSLTTELTAGPTRFED
EESGRWRDVDLDLVKNDDGSVEPKAHPRGLELGAPGGKRLSRIDQHGTARDLVTLGEGEE
RITLRWQGGLPAPKLDGTRATYENAVPGADVVVEATRTGFEQFVDIKRRPTERDYGYTLP
LRAKGLKVVQHKDGSLTFTDRRGKKDQRRAVMPAPVMWDATVDPVSGEHTRRAPVKMKAV
EVKGGVDLVVTPDADFLADPKTTYPVTVDPSTSALANVFDTYVQQGETRDWSTDTELDLG
NPGTKNANGTPRTARSFISWDTRPVQDALVMDAKLSLWNFHSANEKDCKAQPWEVWSAGA
ASTSSRWTAQPAWTAKKATSNETRGNPACTAAPDGWINADVTGLVQEWASAKAARGHMGL
RAANETVVAQWKRVNSANAATRPPKLTVTYNYRPRTGTKQEAGPPYFSYGGAYVVNSLTP
TLRDTFTDADGDKVNGTFQIFDTATDKQVGNVLVSKWVPSGQVASVTVPAGVLAHGKTYK
FRTSPYDNAHYNTGWSAWKTFTVDTSAPSAPTKVTSTDYPKGAWVKGAGKPGTFTVTPPG
SDHNWLEWSLDGVTWTKEPTGGTGAAKNISVTPPKDGTHTLQVRAVDKADNKSEAVEYTF
HAGPGGFVQPSDGERTARRLPLLAEADGDTFDEVSFSWRRAEADDWVRIPAKDVGAGGSA
LDGWPVALTEGRSDRLVWNATDTVGPDGSVQIKADFTGPKGATGSTAPLTVVVDRNASDA
ATAETGPGSVNLLTGDHTLSATDASAFDLSVSRTASSRTPDKGAKQENQAPIFGKEWVAG
TAAELTDSDFSHLRKISATAVAVVDAEGEETHFTANAAKSAWIPEPGSEDLTLKGGVTGS
FTLTDTEGTVTEFTRTDAAASTWQVSSTLLDGLANSTTTIVSESVTVDGKKLARPRRVVA
PTSAASAAACTATPATKGCRVLEFVYADRTTASGDTFGDHEGRVRELRLWATAPGASEAT
AKSVQKYAYDGAGRLRQAWNPQISPALKSAYDYDGAGRVTTYTPPGELPWTFTYGKAGSA
ATAGEGMLLKASRSGLKPGTTGTQEGTASTAVVYDVPLTGAKAPYKMGAADVKAWGQLDA
PTDAAAVLPADAVPSAHSGDELTPAAYRRADVHYLGVSGREVNTATPGGHLTTTESDRFG
NTVRELSAANRAVALGLTAADKAVQADLGLAGLTPAERADLLATRSLYNDNGTRKLEELG
PLRRVDLTADLKSGATTLVPAGTSVAARGRTLNEYDAGRPSDGTAKVKDQVTKVTTGAEV
REHPGVLGESRVTQTVFDWAKGQPAKTIQDPGGLALTTTTEYDAQGRVVKQLLPGANGSD
AGTRVTSYWSATGSGRCAGRPEWADLVCEVAPGGEVTGGGSQPKELPSFTTEYDWWGSPA
KVTETANGVTRTTTTTYDDAGRQTKVAVTGGTGEQVPQSTTEYDPATGQAVRTTSPTGGS
LTKTFDRLGRQVAYTDGGTTTTEYDLLGRPVKVTDTAPSTVTYTYDTAAEPRGLATKTVD
SVAGAFRATYDADGSVASEQLPGGYTLTQTEDTAGAVTDRTYTRDSDGTTVYSDTVTKSV
HGQVTEHAGWSGQSYRYDATGRLTTVEDTAETVCTRRAYGFDARANRTSLTTASGTPGAD
CPASGGTTAKHTYDSADRLVDPGYAYDAFGRTTAAPGNGSLGYYANDLVHRQTEGGKRQT
WQLDAALRFRSWTVESGSGSSWAKEQSKVNHYDSDGDNPRWIVEDTATGALTRMVDSASG
DLAATTDKTGDAVLQLTTVHGDVALQLPLDKSRAPVALDSDEYGNPRAGQAPARYGWLGG
KQRSAETLTGLTLMGVRLYHPATGRFLSVDPVYGGGNNAYEYVGGDPVNRFDLDGKWWKK
VKRGLKRVGRNVRKNWRTYAGYGATAACIVASAGTCAIASVAVFAATSAADGRGGKWRTK
KYWRSTAKSAAWTAVGVGAGRFAAGSWWKSSKGFSRGGRHAAGRSRHAKRFSYRRTAWGY
AGNAWTGTLTCGMSWKMRYC
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccaccgcagtgaacacgcgcccgtacccgaggacaccgggtaccgaagacgccgc
cggttcggcgacgggcccgcgccgaagtcgctcgccaccgggctcgcgctgctcatggcc
gtgtcgtgtctgtacggcgccgaggccgcgacggccgcgcccgcggagcccaccgcgggc
aaggccgcgaagcccgtcgccacgaccgccgcggacctcgcgtcggcccgggtcgccgcc
cgcctgcacggcaagcggatcgaggccctggcggagcgcaccgagacgtcgacgacctgg
gccaaccccaacggcagcctcaccaccgaactgaccgcggggcccacccggttcgaggac
gaggagtccggccggtggcgggacgtcgacctcgacctggtgaagaacgacgacggctcg
gtggagccgaaggcccacccgcgcggcctggagctcggggcgcccggcggcaagcgcctg
tcccgcatcgaccagcacggcaccgcccgcgacctggtcaccctcggcgagggcgaggag
cgcatcacgctccggtggcagggcggcctgcccgcgccgaagctggacggcacccgcgcc
acgtacgagaacgccgtgcccggcgccgacgtggtggtcgaggccacccgcaccggcttc
gagcagttcgtggacatcaagcgcaggccgacggagcgggactacggctacaccctgccc
ctgcgcgccaagggcctcaaggtcgtccagcacaaggacggcagcctcaccttcaccgac
cgccgcggcaagaaggaccagcggcgggccgtcatgcccgcgcccgtgatgtgggacgcc
accgttgaccccgtctccggcgagcacacccgccgcgccccggtgaagatgaaggccgtc
gaggtcaagggcggcgtcgacctcgtcgtcacccccgacgcggacttcctcgccgacccg
aagaccacataccccgtcaccgtcgacccgtccacctccgccctggccaacgtcttcgac
acctacgtccagcagggcgagacccgggactggtccaccgacaccgagctcgacctcggc
aacccgggcacgaagaacgccaacggcacgccgcgcacggcgcgttccttcatctcctgg
gacacccggcccgtccaggacgcgctcgtcatggacgcgaagctgtcgctgtggaacttc
cactcggccaacgagaaggactgcaaggcccagccgtgggaggtgtggtccgccggagcc
gcgtccacgtcctcgcgctggaccgcgcagcccgcgtggaccgcgaagaaggcgacgtcg
aacgagacccgcggcaacccggcgtgcaccgccgcgcccgacggctggatcaacgccgac
gtcaccggcctcgtccaggagtgggcctcggcgaaggccgcccgcggccacatgggcctg
cgcgccgcgaacgagaccgtggtcgcgcagtggaagcgggtcaactccgcgaacgccgcg
acccgtccgcccaagctgaccgtcacctacaactaccggccgcgcaccggcaccaagcag
gaggcgggcccgccgtacttctcctacggcggcgcgtacgtggtgaacagcctcaccccg
acgctgcgcgacaccttcaccgacgcggacggcgacaaggtcaacggcaccttccagatc
ttcgacaccgccaccgacaagcaggtcgggaacgtgctggtgtcgaagtgggtgccgtcc
gggcaggtcgcgtcggtgaccgtgcccgcgggcgtgctcgcgcacggaaagacgtacaag
ttccgtacgtctccgtacgacaacgcgcactacaacacaggctggtcggcgtggaagacc
ttcacggtcgacacctccgcgccgtccgcgcccacgaaggtcacgtccacggactacccg
aagggcgcctgggtgaagggcgcgggcaagcccggcaccttcaccgtcacgccgcccggc
tccgaccacaactggctggagtggtccctggacggcgtgacctggacgaaggagcccacc
ggcgggacgggcgcggcgaagaacatctccgtcaccccgccgaaggacggcacgcacacc
ctccaggtacgcgccgtcgacaaggccgacaacaagtccgaggccgtcgagtacaccttc
cacgccggtcccggcggcttcgtgcagccgtccgacggcgagcgcaccgcgcggcgcctg
ccgctgctcgccgaggccgacggcgacacgttcgacgaggtgtccttctcgtggcgccgc
gccgaggccgacgactgggtgcggatccccgccaaggacgtcggcgcgggcggcagcgcg
ctcgacggctggcccgtcgccctcaccgagggccgcagcgacaggctggtgtggaacgcc
accgacaccgtcggccccgacggcagcgtgcagatcaaggccgacttcaccgggccgaag
ggcgccacgggcagcaccgcgccgctcaccgtcgtcgtcgaccggaacgccagtgacgcc
gcgaccgccgagaccggccccggctcggtgaacctgctcaccggtgaccacaccctgtcc
gccacggacgcctccgcgttcgacctgtcggtgagccgcaccgcctcgtcgcggaccccc
gacaagggggccaagcaggagaaccaggcgccgatcttcggcaaggagtgggtggcgggc
accgccgccgagctgaccgactcggacttctcgcacctgcggaagatctccgcgacggcc
gtggccgtcgtcgacgccgagggcgaggagacccacttcaccgcgaacgcggccaagagc
gcgtggatcccggagcccggctccgaggacctcacgctcaagggcggcgtcaccgggtcg
ttcacgctgaccgacaccgagggcaccgtcaccgagttcacccgcaccgacgccgccgcc
agcacctggcaggtgtccagcaccctcctcgacgggctcgccaactcgacgacgaccatc
gtgtccgagtccgtgaccgtcgacggcaagaagctggcccgcccccggcgcgtggtcgcg
cccacctcggccgcgtccgccgccgcctgcaccgcgactccggcgaccaagggctgccgc
gtccttgagttcgtgtacgcggaccgcacgaccgcctccggcgacaccttcggcgaccac
gagggccgggtcagggagctgcgcctgtgggccaccgcccccggcgcgagcgaggccacc
gccaagtccgtccagaagtacgcctacgacggcgccggccggctgcgccaggcctggaac
ccgcagatcagcccggccctcaagtccgcctacgactacgacggcgcgggccgggtcacc
acgtacaccccacccggcgaactgccctggaccttcacgtacggcaaggcgggcagcgcc
gccaccgccggtgagggcatgctcctgaaggcgtcccgctccggcctgaagccgggcacc
accggcacgcaggagggcaccgcgagcaccgccgtcgtctacgacgtgccgctgaccggc
gccaaggccccgtacaagatgggcgcggccgacgtgaaggcgtgggggcagctcgacgcc
ccgacggacgcggcggcggtgctccccgccgacgccgtgccgtccgcgcactccggcgac
gagctgaccccggccgcgtaccggcgcgccgacgtgcactacctgggcgtgtcgggccgc
gaggtcaacacggcgacgcccggcgggcacctcaccaccaccgagtccgaccgcttcggc
aacacggtgcgcgaactgagcgcggccaaccgcgcggtcgccctgggcctgaccgccgcc
gacaaggccgtccaggccgacctgggcctggccggactcaccccggcggagcgcgccgac
ctgctcgccacccgctccctgtacaacgacaacggcacccgcaagctggaggagctcggc
ccgctgcggcgcgtcgacctgacggcggacctgaagtcgggcgccaccaccctggtcccg
gcgggcacgtcggtggccgcgcgcggcaggaccctcaacgagtacgacgccgggcgtccc
tcggacggcaccgccaaggtcaaggaccaggtcaccaaggtcacgacgggcgccgaggtc
cgcgagcacccgggcgtcctcggcgagagccgcgtgacgcagacggtgttcgactgggcc
aagggccagcccgcgaagacgatccaggacccgggcgggctcgcgctcaccacgaccacc
gagtacgacgcgcagggccgggtcgtcaagcagctcctgccgggcgcgaacggctcggac
gccgggacccgcgtgaccagctactggtcggcgacgggcagcggccgctgcgccgggcgc
ccggagtgggccgacctggtctgcgaggtcgcgcccggcggcgaggtcaccgggggtggc
agccagcccaaggaactgccctcgttcaccaccgagtacgactggtgggggagccccgcg
aaggtcaccgagaccgcgaacggcgtgacccgcacgaccacgaccacgtacgacgacgcg
ggccgccagaccaaggtggccgtgaccggcggcacgggcgagcaggtcccccagtccacg
accgagtacgacccggccaccggccaggccgtgcggacgacgtcgcccacgggcggcagc
ctcaccaagacgttcgacaggctgggccgccaggtcgcctacaccgacggcggcaccacc
accaccgagtacgacctgctcggccgcccggtgaaggtcaccgacacggcgccgtccacc
gtcacgtacacctatgacaccgcggccgagccgcggggcctggccacgaagaccgtcgac
tccgtcgcgggcgcgttccgggccacgtacgacgccgacggctccgtggcgagcgagcag
ctgcccggcggctacaccctcacgcagaccgaggacaccgcgggcgcggtcacggaccgc
acgtacacgcgggacagcgacggcacgaccgtctactccgacaccgtgaccaagtcggtc
cacggccaggtcaccgagcacgcgggctggtcggggcagagctaccgctacgacgccacg
gggcggctgaccaccgtcgaggacaccgccgagacggtgtgcacgcgccgcgcctacggc
ttcgacgcgcgcgccaaccgcacgtccctgaccaccgcgtccggcacgcccggcgccgac
tgccccgcatcgggaggcaccaccgccaagcacacctacgacagcgccgaccggctcgtc
gacccggggtacgcctacgacgccttcggccgcaccaccgcggcccccggcaacggctcg
ctcggctactacgccaacgacctggtgcaccggcagacggagggcggcaagcggcagacc
tggcagctcgacgccgccctgcggttccgctcctggaccgtcgagtccggctccggctcc
tcctgggccaaggagcagtccaaggtcaaccactacgacagcgacggcgacaacccccgc
tggatcgtggaggacaccgccaccggcgccctgacccgcatggtggactccgcctccggc
gacctggccgccaccacggacaagaccggcgacgcggtgctccagctcaccaccgtccac
ggcgacgtggcgctccagctgcccctcgacaagagccgggcgcccgtcgcgctcgactcc
gacgagtacggcaacccgcgcgcgggccaggccccggcccgctacggctggctgggcggc
aaacagcgttcggccgagaccctcaccggcctcaccctgatgggcgtgcgcctgtaccac
ccggccaccggccgcttcctgtccgtcgacccggtctacggcggcggcaacaacgcctac
gagtacgtgggcggcgaccccgtcaaccgcttcgacctcgacggcaagtggtggaagaag
gtcaagcgcggcctcaagcgggtcggccgcaacgtccgcaagaactggcgcacgtacgcc
gggtacggcgcgacggcggcgtgcatcgtcgcctcggcgggcacctgcgcgatcgcgagc
gtcgcggtgttcgccgcgacgtccgccgccgacggacgcggcggcaagtggcggacgaag
aagtactggcggtcgacggccaagtcggcggcctggaccgccgtgggcgtcggcgcgggc
cgcttcgccgcgggctcctggtggaagtccagcaagggcttctcccggggcggcaggcac
gccgcgggccgcagccggcacgccaagcggttctcctaccgcaggacggcgtggggctac
gcgggcaacgcgtggacgggcacgctcacctgcgggatgagctggaagatgcggtactgc
tag
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