Streptomyces sp. YIM 121038: C9F11_15225
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Entry
C9F11_15225 CDS
T11066
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C9F11_15225 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_15225 (recD2)
Enzymes [BR:
styi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C9F11_15225 (recD2)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C9F11_15225 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
AAA_16
NPHP3_N
HTH_IclR
PhoH
TraI_hel_assoc_N
nSTAND3
DEAD
UvrD_C
DUF87
ABC_tran
UvrD-helicase
AAA
AAA_28
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QCX76712
UniProt:
A0A5B7USS9
LinkDB
All DBs
Position
complement(3679948..3682200)
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AA seq
750 aa
AA seq
DB search
MSTAARQGSPGVPAPRTAVLEGVLERITFASEETGYTVARVDTGRGAGDLLTVVGSLLGA
QVGESLRMEGRWGSHPQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITT
HFGVDTLDVIEHEPGRLIEVPGLGPKRTKKIAEAWEEQKAIKEVMVFLQGVGVSTSIAVR
IYKKYGDASISVVKNQPYRLAADVWGIGFLTADRIAQSVGIPHDSPDRVKAGLQYALSQS
TDQGNCFLPEERLIADAVKLLQVDTGLVIDCLAELAGEEEGVVRESVPGPDGPDVTAVYL
VPFHRAELSLSAQLLRLLRADDDRMPGFQDVAWDKALGWLAGRTGAELAPEQEAAVRLAL
TRKVAVLTGGPGCGKSFTVRSIVELARAKKAKVLLAAPTGRAAKRLAELTGAEASTVHRL
LELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSV
GAGEVLRDLLSDGSPIPVVRLTRIFRQAQESGVVTNAHRINSGQPPLTQGLADFFLFVEE
DTEEAGRLTVDVAARRVPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPGRPGL
AEKRFGGRVFRVGDKVTQIRNNYEKGSNGVFNGTVGVVTALDQDEQHLTVLTDEDEEISY
DFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVVLVGS
RKALGQAVRTVSAGRRCTALDHRLAGRHTA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgctgcccggcagggttcgcccggagtccccgcaccccgcacggccgtcctg
gagggcgtcctggagcggatcacgttcgccagcgaggagacggggtacacggtcgcgcgc
gtggacaccggccgcggtgccggggacctgctcacggtcgtcggctcgctgctcggcgcg
caggtcggcgagtcgctgcggatggagggccgctggggctcccacccgcagtacggcaag
cagttcaccgtggagaactacacgacggtgctgcccgccacgatccagggcatccgccgc
tatctcggctccggcctcatcaagggcatcggccccgtcatggccgaccggatcacgacc
cacttcggcgtggacaccctggacgtcatcgagcacgagcccgggcggctcatcgaggtg
ccgggcctcggccccaagcgcaccaagaagatcgccgaggcctgggaggagcagaaggcc
atcaaggaggtcatggtcttcctccagggcgtcggcgtctccacctccatcgccgtacgg
atctacaagaagtacggcgacgcctccatctccgtggtcaagaaccagccgtaccgcctg
gccgccgacgtctggggcatcggcttcctcaccgccgaccgcatcgcccagtccgtcggc
atcccgcacgacagccccgaccgcgtcaaggccggcctccagtacgccctgtcgcaatcc
accgaccaggggaactgcttcctgcccgaggagcgcctcatcgccgacgcggtcaagctc
ctccaggtcgacacgggcctggtcatcgactgcctggccgagctcgcgggcgaggaggag
ggcgtggtgcgcgagtccgtgccgggccccgacggcccggacgtcacagccgtctatctg
gtgcccttccaccgcgccgaactgtccctgtccgcccagctgttgcgcctcctgcgcgcc
gacgacgaccggatgcccggcttccaggacgtggcctgggacaaggcgctcggctggctg
gcggggcgcaccggagccgagctcgcgcccgagcaggaggcggccgtccggctcgcgctg
acccgcaaggtcgccgtcctcaccggcgggcccggctgcggcaagtccttcaccgtgcgc
tccatcgtggagctggcccgcgccaagaaggccaaggtgctgctcgccgcgcccacgggc
cgcgccgccaagcgcctggccgagctcaccggcgccgaggcctccacggtccaccgcctg
ctcgaactgaagccgggcggcgacgccgcgtacgaccgggaccggcccctggacgccgac
ctggtggtggtggacgaggcctccatgctggacctgctcctcgccaacaagctggtgaag
gccgtcccgcccggcgcgcacctgctgttcgtcggcgacgtcgaccagctgccgagcgtc
ggcgcgggcgaggtcctgcgggacctcctgagcgacggcagcccgatccccgtcgtgcgc
ctgacccgcatcttccggcaggcccaggagtcgggcgtggtcaccaacgcccaccggatc
aactccgggcagccgcccctgacccagggcctcgcggacttcttcctcttcgtggaggag
gacacggaggaggccgggcgcctcaccgtcgacgtcgcggcccgccgcgtcccggcgaag
ttcgggctggacccgcgcagggacgtccaggtcctggccccgatgcaccgcggccccgcg
ggcgccggcacgctgaacggcctgctccagcaggccatcacccccggccgccccggcctg
gccgagaagcgcttcggcggccgtgtcttccgcgtgggggacaaggtcacccagatcagg
aacaactacgaaaaggggagcaacggcgtcttcaacggcacggtgggcgtcgtcaccgcc
ctggaccaggacgagcagcacctgacggtcctgaccgacgaggacgaggagatctcctac
gacttcgacgaactcgacgagctcgcccacgcgtacgcggtgacgatccaccgctcccag
ggcagcgagtatccggcggtggtgatccctgtcaccaccggcgcctggatgatgcttcag
cggaatctgctctatacggccgtgacacgcgccaagaagctggtcgtactcgtcggttcg
cgcaaggctctggggcaggccgtacgcacggtctccgcgggcaggcgctgcacggccctg
gaccaccggctcgcgggccgccacacggcttga
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