KEGG   Streptomyces sp. YIM 121038: C9F11_16300
Entry
C9F11_16300       CDS       T11066                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
  KO
K03530  DNA-binding protein HU-beta
Organism
styi  Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:styi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:styi03032]
    C9F11_16300 (hup)
   03036 Chromosome and associated proteins [BR:styi03036]
    C9F11_16300 (hup)
   03400 DNA repair and recombination proteins [BR:styi03400]
    C9F11_16300 (hup)
DNA replication proteins [BR:styi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    C9F11_16300 (hup)
Chromosome and associated proteins [BR:styi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    C9F11_16300 (hup)
DNA repair and recombination proteins [BR:styi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      C9F11_16300 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding Urease_beta HU-HIG
Other DBs
NCBI-ProteinID: QCX76921
UniProt: A0A5B7UT98
LinkDB
Position
complement(3910842..3911123)
AA seq 93 aa
MNRSELVAALADRAEVTRKDADAVLAAFAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGEPINIPAGYSVKVSAGSKLKEAAKGK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaaccgcagtgagctggtggccgcgctggccgaccgcgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgttcgccgagaccgtcggcgagatcgttgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcccgcaacccgcagaccggcgagccgatcaacatcccggccggttacagcgtcaaggtc
tccgcgggcagcaagctcaaggaagccgccaagggcaagtaa

DBGET integrated database retrieval system