Streptomyces sp. YIM 121038: C9F11_16300
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Entry
C9F11_16300 CDS
T11066
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
KO
K03530
DNA-binding protein HU-beta
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
styi03032
]
C9F11_16300 (hup)
03036 Chromosome and associated proteins [BR:
styi03036
]
C9F11_16300 (hup)
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_16300 (hup)
DNA replication proteins [BR:
styi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C9F11_16300 (hup)
Chromosome and associated proteins [BR:
styi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C9F11_16300 (hup)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C9F11_16300 (hup)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QCX76921
UniProt:
A0A5B7UT98
LinkDB
All DBs
Position
complement(3910842..3911123)
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AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAAFAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGEPINIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgcgctggccgaccgcgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgttcgccgagaccgtcggcgagatcgttgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcccgcaacccgcagaccggcgagccgatcaacatcccggccggttacagcgtcaaggtc
tccgcgggcagcaagctcaaggaagccgccaagggcaagtaa
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