Streptomyces sp. YIM 121038: C9F11_20840
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Entry
C9F11_20840 CDS
T11066
Symbol
gyrA1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
styi03032
]
C9F11_20840 (gyrA1)
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_20840 (gyrA1)
Enzymes [BR:
styi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C9F11_20840 (gyrA1)
DNA replication proteins [BR:
styi03032
]
Prokaryotic type
DNA Topoisomerases
C9F11_20840 (gyrA1)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C9F11_20840 (gyrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
Motif
Other DBs
NCBI-ProteinID:
QCX77802
LinkDB
All DBs
Position
4939876..4942461
Genome browser
AA seq
861 aa
AA seq
DB search
MADENNPTPSEDGEGQTVRIEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRV
LYAMYDGGYRPEKGFYKCARVVGDVMGNYHPHGDSSIYDALVRLAQPWSMRMPLVDSNGN
FGSPGNDPAAAMRYTECKMAPLSMEMVRDIDEDTVDFTDNYDGRSQEPTVLPSRFPNLLI
NGSAGIAVGMATNIPPHNLREVAAGAQWALEHPEASHEELLDALIERIKGPDFPTGALVV
GRKGIEEAYRTGRGSITMRAVVEVEEIHNRQCLVVTELPYQVNPDNLAQKIADLVKDGRV
GGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALVDGVPRTL
SLDAFIRHWVGHQIEVIVRRTKFRLRKAEERAHILRGLLKALDAIDEVIALIRRSDTVDV
AREGLMGLLEIDEIQANAILEMQLRRLAALERQKIIQEHDELQQKINEYNAILASPEKQR
AIVSEELAAIVDKFGEDRRSALVPFDGDMSIEDLIAEEDIVVTITRGGYIKRTKTEDYRS
QKRGGKGVRGAKLKQDDIVDHFFVSTTHHWLLFFTNKGRVYRAKAYELPDAGRDARGQHV
ANLLAFQPDESIAEILAIRDYEAVPYLVLATKGGLVKKTPLKDYDSPRSGGVIAINLRET
DDGSDDELIGAELVSAEDDLLLISKKAQSIRFTATDDALRPMGRATSGVKGMSFRDGDQL
LSMNVVRPGTFVFTATDGGYAKRTPVDEYRVQGRGGLGIKAAKIVEDRGELVGALVVEET
DEILAITLSGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGREAEEVDGV
DESSDGTPAVGTDEGTPSPAE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaacaaccccactccttccgaggacggcgagggtcagacggtgcgcatc
gagcccgtcgggctcgagaccgagatgcagcgctcgtacctcgactacgcgatgtccgtc
atcgtgtcgcgcgcgctgccggacgtccgcgacggtctcaagcccgtgcaccgccgcgtc
ctgtacgcgatgtacgacggcgggtaccgccccgagaagggcttctacaagtgcgcccgc
gtcgtcggcgacgtcatgggcaactaccacccgcacggcgactcctcgatctacgacgcg
ctcgtccgcctcgcgcagccgtggtcgatgcgcatgcccctggtggactcgaacggaaac
ttcggctctccgggcaacgaccccgcggccgccatgcgctacaccgagtgcaagatggcg
ccgctgtccatggagatggtccgggacatcgacgaggacaccgtcgacttcacggacaac
tacgacggccgctcccaggagcccaccgtcctgccctcccgcttcccgaacctgctgatc
aacggctcggcgggcatcgcggtcggcatggcgaccaacatcccgccgcacaacctccgc
gaggtcgcggcgggcgcgcagtgggccctggagcacccggaggcctcgcacgaggagctg
ctcgacgccctgatcgagcgcatcaagggccccgacttcccgaccggtgccctcgtagtg
ggccgcaagggcatcgaggaggcgtaccgcacggggcgcggctccatcacgatgcgcgcg
gtcgtcgaggtcgaggagatccacaaccgccagtgcctggtggtcacggagctgccctac
caggtcaacccggacaacctcgcgcagaagatcgccgacctggtgaaggacggcagggtc
ggcggcatcgccgacgtccgcgacgagacgtcctcgcgcacgggccagcgcctggtcatc
gtcctcaagcgggacgcggtcgccaaggtcgtcctgaacaacctctacaagcacacggac
ctgcagacgaacttcggcgccaacatgctggcgctcgtcgacggcgtgccgcgcaccctc
tccctggacgcgttcatccggcactgggtgggccaccagatcgaggtcatcgtccggcgc
acgaagttccggctgcgcaaggccgaggagcgcgcccacatcctgcgcggcctcctcaag
gccctggacgccatcgacgaggtcatcgcgctcatccggcgcagcgacaccgtcgacgtc
gcgcgcgagggcctgatgggcctcctggagatcgacgagatccaggccaacgccatcctg
gagatgcagctccgccgccttgccgccctggagcgccagaagatcatccaggagcacgac
gagctccagcagaagatcaacgagtacaacgcgatcctggcctcgcccgagaagcagcgc
gcgatcgtcagcgaggagctcgccgcgatcgtcgacaagttcggcgaggaccgtcgctcc
gccctggtgcccttcgacggtgacatgtccatcgaggacctcatcgccgaagaggacatc
gtcgtcaccatcacgcgcggcggctacatcaagcgcaccaagacggaggactaccgctcg
cagaagcgcggcggcaagggcgtgcgcggcgcgaagctgaagcaggacgacatcgtcgac
cacttcttcgtgtcgacgacgcaccactggctgctgttcttcaccaacaagggccgcgtc
taccgtgcgaaggcgtacgagctcccggacgccggccgggacgcacgcggccagcacgtc
gcgaacctgctcgccttccagcctgacgagtcgatcgccgagatcctcgcgatccgcgac
tacgaggccgtgccctacctggtgctcgccaccaagggcggtctggtcaagaagacgcct
ctgaaggattacgattcgcctcgctccggcggtgtcatcgccatcaatctgcgcgagacg
gacgacggttcggacgacgagctgatcggcgcggagctggtgtccgccgaggacgatctg
ctgctgatcagcaagaaggcgcagtcgatccggttcaccgcgacggacgacgcgctgcgc
ccgatgggccgtgcgacctccggcgtcaagggcatgagcttccgcgacggtgatcagctg
ctctcgatgaatgtggtcaggcccggtacgttcgtcttcaccgccaccgatggtgggtac
gcgaagcggacccctgtcgacgagtaccgcgtccagggccgcggtggtctcggcatcaag
gccgccaagatcgtcgaggaccgtggtgaactcgtcggcgcactggtggtcgaggagacc
gacgagatcctcgccatcaccctctccggcggtgtgattcgcacgcgagtcaacgaggtc
agggagacgggccgtgacaccatgggcgtccaactgatcaacctgggcaagcgcgatgcc
gtcgtcggcatcgctcgtaacgccgaggccgggcgcgaggccgaggaagtcgacggggtc
gacgaatcgtctgacggcactccggccgtcggtacggacgagggcacaccgtccccggcc
gagtag
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