Streptomyces sp. YIM 121038: C9F11_25065
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Entry
C9F11_25065 CDS
T11066
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi03420
Nucleotide excision repair
styi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C9F11_25065 (uvrD2)
03430 Mismatch repair
C9F11_25065 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_25065 (uvrD2)
Enzymes [BR:
styi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C9F11_25065 (uvrD2)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C9F11_25065 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
C9F11_25065 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
DNA_pol3_gamma3
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QCX78625
UniProt:
A0A5B7UXY7
LinkDB
All DBs
Position
5855730..5858192
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AA seq
820 aa
AA seq
DB search
MSSLFDDSFLADLKPSQGAEEEPPPPPEDSAPEPIPDDLFDGRFDAPAPRDGYYRDGAPR
PALDPAALLDGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAERGVHPGQIL
AITFTNKAAGEMKERVEQLVGPRAGAMWVSTFHSACVRILRREYKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVHLLRAFPDVAEHYRRRFRHVMVDEYQDTNHAQYALVRELV
GPAPAEGEEGEGPAELCVVGDADQSIYAFRGATIRNILQFEEDYADATTILLEQNYRSTQ
TILSAANAVIERNESRRPKNLWTNAGAGAGITGYVADTEHDEAQFVADEIDRLTDAGDAK
AGDVAIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDGVP
MRRILNVPKRGIGDRAEAMIDALAQREKISFPQALRRVDEAYGMAARSVNAVKRFNTLME
ELRTVVESGAGPAVVLEAVLERTGYLAELQSSTDPQDETRIENLQELAAVALEFEQERQE
GEAGSLSDFLERVALVADSDQIPDEEDDGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFP
HMRALGQTKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLEEIPATHL
EWKRTGSVGAPASSGPAGGVASSLSSSRSRAGGAQGFATRRAAEKPVVSLAVGDRVTHDQ
FGLGTVVGVKGSGANAEATVDFGGEKPKRLLLRYAPVEKL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcaagccctcgcagggcgctgag
gaggagcccccgccgccgcccgaggacagcgctccggagccgattccggacgacctgttc
gacgggaggttcgacgcgcccgcaccccgggacgggtactaccgggacggcgccccccgc
ccggccctcgacccggcggcgctcctcgacgggctgaacgagaaccagcgcgcggccgtc
gtgcacgcgggctcccccctgctcatcgtcgcgggcgcgggctccggcaagacccgcgta
ctgacccaccgcatcgcgtacctgctcgccgagcgcggggtgcaccccggccagatcctc
gcgatcacgttcacgaacaaggcagcgggcgagatgaaggagcgcgtcgagcagctcgtc
ggcccgcgcgcgggcgcgatgtgggtgtcgacgttccacagcgcgtgcgtgcgcatcctg
cgccgcgagtacaagaagctgggcttcacgtcctcgttctcgatctacgacgccgcggac
tccaagcgcctgatggccctggtctgccgggacctcgacctggacccgaagaagttcccg
ccgaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcgtacgcgatgtac
cagtcgcgcctccgcgaggccaacgccctggacttcgacgacctgatcatgacgacggtg
cacctcctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcacgtc
atggtcgacgagtaccaggacacgaaccacgcgcagtacgcgctggtgcgcgagctggtc
ggccccgctccggcggagggcgaggaaggcgaggggcccgccgagctgtgcgtggtcggt
gacgccgaccagtccatctacgccttccgcggcgccacgatccgcaacatcctccagttc
gaggaggactacgcggacgccaccacgatcctcctggagcagaactaccgctccacgcag
acgatcctcagcgccgccaacgcggtcatcgagcgcaacgagagccgccgccccaagaac
ctgtggacgaacgcgggcgcgggcgccggcatcaccggctacgtcgccgacaccgagcac
gacgaggcgcagttcgtcgccgacgagatcgaccgcctcacggacgcgggcgacgcgaag
gccggcgacgtggcgatcttctaccggacgaacgcgcagtcgcgtgtcttcgaagagatc
ttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtccgcttctacgagcgcaag
gaagtccgcgacgtcctggcctacctgcgggttctcgccaacccggaggacggcgtaccg
atgcgccgcattctgaacgtgccgaagcgcggcatcggcgaccgcgccgaagccatgatc
gacgcgctggcgcagcgcgagaagatctccttcccgcaggccctgcgccgcgtggacgag
gcgtacggcatggcggcccgctcggtgaacgccgtcaagcggttcaacacgctcatggag
gagctgcgcaccgtcgtggagtcgggcgcgggcccggcggtcgtcctggaggccgtgctc
gaacggaccgggtacctggccgagttgcagtcctccacggacccgcaggacgagacgcgc
atcgagaacctccaggaactggccgccgtggccctggagttcgagcaggagcgccaggag
ggcgaggcggggtcgctgtcggacttcctggagcgggtggcgctcgtcgccgactccgac
cagatcccggacgaggaggacgacggctcgggcgtcatcacgctgatgacgctgcacacc
gccaagggcctcgaattccccgtcgtgttcctgacgggcatggaggacggcgtgttcccg
cacatgcgcgccctcggccagaccaaggagctggaggaggagcgccgcctcgcgtacgtc
ggcatcacgcgcgcgcgggagcggctctacctcacgcggtcctcgatgcgcagcgcctgg
ggccagccgtcgtacaacccgccgtcgcgcttccttgaggagatcccggcgacccacctg
gagtggaagcggacgggttccgtcggcgcacccgcctcgtcggggcccgccgggggagtg
gcgtcctcactgtcgtcgtcgcgctcgcgcgcggggggcgcgcagggctttgccacgcgc
cgggcagcggagaagccggtggtctcgctcgccgtgggcgaccgcgtcacgcacgaccag
ttcggcctcggcacggtggtcggcgtgaagggcagtggggcgaacgccgaggcgacggtg
gacttcggcggggagaagccgaagcgcctgctgctgcggtacgcgccggtcgagaagctc
tga
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