Streptomyces sp. YIM 121038: C9F11_29620
Help
Entry
C9F11_29620 CDS
T11066
Symbol
rimO1
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
styi03009
]
C9F11_29620 (rimO1)
Enzymes [BR:
styi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C9F11_29620 (rimO1)
Ribosome biogenesis [BR:
styi03009
]
Prokaryotic type
ribosomal protein modification factors
C9F11_29620 (rimO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCX79515
UniProt:
A0A5B7V0F1
LinkDB
All DBs
Position
6896800..6898299
Genome browser
AA seq
499 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLEADGWALVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISNRLQVIL
GGGSVEAHTPRDRRKLLPISPAERQEAGAEVALPGHAPVDLPDGLAPASGPRAPLRRRLG
TSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVVPYFDLSF
QHSAPGVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESEADVAELERFLT
GARLDAIGVFGYSDEEGTEAATYEHKLDQDVVDERLARVARLAEELTSQRAEERVGERVE
VLIEAVDDEEGAIGRAAHQAPETDGQIRFVDSAPGDGLEIGRMVVAKVVGTEGVDLLAER
CEVLEASDRPHGAGEGTGR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgcactgtcgcccttgtcacgctcggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggccctcgtggaggacgccgag
gaagcggatgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctgctcgaagccaatgacctgaagggccacggccgcacccaggccgtcgtg
gccgtcggctgcatggccgagcgctacggcaaggagctggccgaagcgctgcccgaagcc
gacggcgtcctcggcttcgacgactacgccgacatctccaaccgcctccaggtcatcctc
ggcggcggcagtgtcgaggcgcacactccgcgtgaccgccgcaagctcctgccgatcagc
ccggccgagcgccaggaggccggcgcggaggtcgccctgcccgggcacgccccggtcgac
ctgccggacggcctcgcgcccgcgtccgggccgcgcgcgccgctgcgccgccgcctcggc
acgagccccgtggcctccgtgaagctggcctccggctgcgaccgcagatgctcgttctgc
gccatcccgtccttccgcggctcgttcatctcgcgccgcccctcggacgtgctcggcgag
acgcgctggctcgccgagcagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcgtacggcaaggacctcggcgacatccgcctcctggagacgctgctgcccgagctcgcg
gccgtcgacggcatcgagcgggtgcgggtgagctacctccaacccgccgagatgcgcccc
ggcctgatcgacgtcctgacgtcgacggagaaggtcgtgccgtacttcgacctgtccttc
cagcactccgcgcccggcgtcctgcgggccatgcggcgcttcggcgacaccgaccgcttc
ctggagctgctcgacacgatccggagcaaggcgccgcaggccggtgtgcgctccaacttc
atcgtgggtttccccggcgagtccgaggccgacgtggcggagctcgagcgcttcctcacc
ggcgcccgcctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacgagcacaagctcgaccaggacgtcgtcgacgagcggctcgcgcgcgtggcg
cgcctcgccgaggagctgacgtcccagcgcgcggaggagcgcgtcggcgagcgcgtcgag
gtcctcatcgaggccgtcgacgacgaggagggcgccatcggccgggccgcgcaccaggcc
cccgagaccgacggacagatccgtttcgtggactccgcccctggggacggcctggagatc
ggccgtatggtcgtggcaaaggtcgtcggcacggagggcgtggatctgttggctgagcgg
tgcgaggtcctggaggcttccgaccgaccccatggagccggtgaagggacgggcagatga
DBGET
integrated database retrieval system
