KEGG   Streptomyces sp. YIM 121038: C9F11_29875
Entry
C9F11_29875       CDS       T11066                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
styi  Streptomyces sp. YIM 121038
Pathway
styi00230  Purine metabolism
styi00240  Pyrimidine metabolism
styi01100  Metabolic pathways
styi01232  Nucleotide metabolism
Module
styi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
styi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:styi00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    C9F11_29875 (nrdJ)
   00240 Pyrimidine metabolism
    C9F11_29875 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:styi03400]
    C9F11_29875 (nrdJ)
Enzymes [BR:styi01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     C9F11_29875 (nrdJ)
DNA repair and recombination proteins [BR:styi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    C9F11_29875 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD MqsR_toxin RuvA_C Ribonuc_red_lgN ATG101
Other DBs
NCBI-ProteinID: QCX79566
LinkDB
Position
6959303..6962194
AA seq 963 aa
MTETTSGPARGSRAKGAKGGKGLRIERIHTTPGVHPYDEVAWERRDVVMTNWRDGSVNFE
QRGVEFPDFWSVNAVNIVTSKYFRGAVGTPQREVSLKQLIDRIVQTYRKAGEDHKYFASP
ADAEIFEHELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILEWYKEEG
MIFKGGSGAGLNLSRIRSSKELLSSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMVI
LDVDHPDIEGFIETKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDEFMKA
VESGGKFGLRARMTGDVIEEVDAKSLFRKMAEAAWACADPGIQYDDTINAWHTCPESGRI
NGSNPCSEYMHLDNTSCNLASLNLMKFLKDDGKGNQSFESERFAKVVELVITAMDISICF
ADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYKRS
AELAAVVGPYDGYARNAEPHKRVMKQHADANATAVRMDDLDTPIWAAATEAWQDVQRLGE
KNGFRNSQASVIAPTGTIGLAMSCDTTGLEPDLALVKFKKLVGGGSMQIVNGTVPQALRR
LGYQEEQIEAVVAHIAENGNVIDAPGLKTEHYEVFDCAMGERSISAMGHVRMMAAIQPWI
SGALSKTVNLPETATVEDVEEVYFEAWKMGVKALAIYRDNCKVGQPLSAKKKEEEKAEVT
EKTEATIREAVEKVVEYRPVRKRLPKGRPGITTSFTVGGAEGYMTANSYPDDGLGEVFLK
MSKQGSTLAGMMDAFSIAVSVGLQYGVPLETYVSKFTNMRFEPAGMTDDPDVRMAQSIVD
YIFRRLALDFLPFETRSALGIHSAEERQRHLETGSYEPADEDVDVEGLAQSAPRQTETLK
AVAAPVAKAEVPAPQQAHTSAELVEMQLGIQADAPLCFSCGTKMQRAGSCYICEGCGSTS
GCS
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgaccgagacgacgagcggccccgcacgaggttcccgcgccaagggagccaagggcggc
aagggcctgcgcatcgagcgcatccacacgacccccggcgtgcacccttacgacgaggtg
gcctgggagcgtcgtgacgtcgtcatgaccaactggcgcgacggttcggtcaacttcgag
cagcgcggcgtcgagttccccgacttctggtcggtgaacgcggtcaacatcgtcacgagc
aagtacttccggggcgcggtcggcaccccgcagcgtgaggtcagcctcaagcagctcatc
gaccgcatcgtgcagacgtaccggaaggccggcgaggaccacaagtacttcgcctccccc
gcggacgccgagatcttcgagcacgagctggcgtacgccctcctgcaccagatcttcagc
ttcaactcgccggtgtggttcaacgtcggcacgccccagccgcagcaggtctccgcctgc
ttcatcctctcggtcgacgactccatggagtcgattctcgagtggtacaaggaagagggc
atgatcttcaagggcggctccggggccggcctgaacctctcccgcatccgttcctccaag
gaactgctgtcctccggaggcaacgcctcgggtccggtctccttcatgcggggcgccgac
gcctccgcaggaacgatcaagtcgggcggcgccacccgccgcgcggccaagatggtcatc
ctcgacgtcgaccaccccgacatcgagggcttcatcgagaccaaggtcaaggaagaggag
aagatccgcgcgctgcgcgacgcgggcttcgacatggacctgggcggcgacgacatcacg
tccgtccagtaccagaacgccaacaactcggtccgcgtgaacgacgagttcatgaaggcc
gtggagtccggcggcaagttcggcctccgcgcccggatgaccggcgacgtcatcgaggag
gtcgacgccaagtcgctcttccgcaagatggccgaggccgcctgggcctgcgccgacccg
ggcatccagtacgacgacacgatcaacgcctggcacacctgcccggagtccggccgcatc
aacggctcgaacccgtgcagcgagtacatgcacctggacaacacgtcctgcaacctcgcc
tcgctgaacctgatgaagttcctcaaggacgacggcaagggcaaccagtccttcgagtcc
gagcgcttcgccaaggtcgtcgagctggtcatcacggcgatggacatctccatctgcttc
gccgacttcccgacccagaagatcggcgagaacacccgcgccttccgccagctcggcatc
ggctacgccaacctcggcgccctgctgatggccaccggccacgcgtacgactccgacggc
ggccgcgccctcgccggtgccatcacgtcgctgatgaccggcacctcgtacaagcgctcc
gccgagctggccgcggtcgtcggcccgtacgacggctacgcccgcaacgccgagccgcac
aagcgcgtcatgaagcagcacgccgacgccaacgccacggccgtccgcatggacgacctg
gacaccccgatctgggccgccgccacggaggcctggcaggacgtccagcgcctcggcgag
aagaacggtttccgtaactcccaggcctcggtcatcgcccccaccggcaccatcggtctc
gcgatgtcctgcgacaccaccggcctcgagcccgacctggccctggtcaagttcaagaag
ctcgtcggcggcggctcgatgcagatcgtcaacggcaccgtgccgcaggccctgcgccgc
ctgggctaccaggaggagcagatcgaggcggtcgtcgcccacatcgccgagaacggcaat
gtgatcgacgccccgggcctgaagaccgagcactacgaggtcttcgactgcgccatgggt
gagcgctccatctccgcgatgggccacgtccgcatgatggcggccatccagccgtggatc
tccggcgcgctctccaagacggtcaacctgccggagacggcgaccgtcgaggacgtcgaa
gaggtctacttcgaggcctggaagatgggcgtcaaggcgctcgcgatctaccgcgacaac
tgcaaggtcggccagcccctctccgccaagaagaaggaagaggagaaggccgaggtcacg
gagaagaccgaggcgacgatccgcgaggccgtcgagaaggtcgtcgagtaccgtccggtc
cgcaagcgtctgcccaagggccgtcccggcatcaccacctccttcacggtgggcggcgcc
gagggctacatgaccgcgaactcctacccggacgacggtctcggtgaggtcttcctgaag
atgtccaagcagggctccaccctcgcgggcatgatggacgccttctccatcgccgtctcc
gtcggtctgcagtacggcgtgcccctggagacgtacgtctccaagttcacgaacatgcgc
ttcgagccggccggcatgacggacgacccggacgtgcggatggcgcagtcgatcgtcgac
tacatcttccgccgcctcgcgctggacttcctgcccttcgagacccgctccgcgctcggc
atccactccgccgaggagcgtcagcgtcacctggagaccggttcgtacgagccggccgac
gaggacgtcgacgtggagggcctggcccagtccgctccgcgccagacggagaccctgaag
gccgtcgccgccccggtggcgaaggccgaggtgcccgctccgcagcaggcgcacaccagc
gccgagctcgtcgagatgcagctgggcatccaggcggacgcgccgctgtgtttctcctgc
ggtacgaagatgcagcgcgcaggctcgtgctacatctgtgagggctgcggctccaccagc
ggctgcagctga

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