Streptomyces sp. YIM 121038: C9F11_35440
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Entry
C9F11_35440 CDS
T11066
Symbol
sigF6
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
styi03021
]
C9F11_35440 (sigF6)
Transcription machinery [BR:
styi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C9F11_35440 (sigF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
MarR_2
HTH_3
Sigma70_ECF
HTH_23
HTH_37
HTH_24
HTH_31
Trp_repressor
MarR
Motif
Other DBs
NCBI-ProteinID:
QCX80671
LinkDB
All DBs
Position
8534633..8535511
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AA seq
292 aa
AA seq
DB search
MAAATGAVSEVQVPATHSGADGELPLIEAPLSVEPRDARVLSKQFFARLAVLEEGTHEYQ
YVRNTLIELNLSLVRYAATRYRNRGDEREDIVQVGTIGLIKAIDRFDLTREVEFTTFAVP
YIVGEIKRFFRDTSWAVHVPRRLQEARIELVKATEELSSRLDRDPTTAELAELMSLPEEE
VVEARKAANAYTSSSLDTTLLTGAGGDESEAVLADFIGAEDAGYELVEDLNSLAPLIGEL
SERDREIVHMRFVEELTQAEIGERIGVSQMQVSRLLNRILGRLRAGLLPEGA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggctgccgcgacaggtgcagtgtccgaggtccaggtgcccgcaacgcacagcggcgcg
gacggtgaactgccactgatcgaagcgccgctgtccgtcgaaccgcgcgacgcccgggtg
ttgtccaagcagttcttcgcccgcctcgccgtgctggaggagggcacccatgaataccag
tacgtccgcaacacgctgatcgagctgaacctctccctcgtccgctacgcggccacccgc
taccgcaaccgcggcgacgagcgggaagacatcgtgcaggtcggcacgatcggtctgatc
aaggccatcgaccgcttcgacctcacgcgcgaagtggagttcaccacgttcgccgtcccc
tacatcgtcggcgagatcaaacgcttcttccgcgacaccagttgggccgtgcacgtgccg
cgccgcctccaggaggcgcgcatcgagctggtcaaggcgaccgaggagctgtccagccgc
ctcgaccgcgaccccaccaccgccgagctggccgagctgatgtccctgcccgaggaggag
gtcgtcgaggcccgcaaggcggccaacgcctatacgtcctcgtccctcgacaccacgctg
ctcaccggcgccggaggggacgagagcgaggccgtcctcgccgacttcatcggcgcggag
gacgccggatacgaactcgtggaggacctgaacagcctggcgcccctgatcggcgaactg
tccgagcgggaccgggagatcgtccacatgcggttcgtggaggagctgacgcaggcggag
atcggcgagcggatcggggtgtcgcagatgcaggtgtcccgcctgctgaaccgcatcctc
ggccggctgcgcgcgggcctgctgcccgaaggcgcctga
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