Streptomyces sp. YIM 121038: C9F11_40355
Help
Entry
C9F11_40355 CDS
T11066
Name
(GenBank) RNA polymerase sigma factor
Organism
styi Streptomyces sp. YIM 121038
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
PhyR_sigma2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QCX81653
UniProt:
A0A5B7V6E6
LinkDB
All DBs
Position
complement(9560055..9561782)
Genome browser
AA seq
575 aa
AA seq
DB search
MGQECPVISDVPADVPPEVPADGPPEAVPAASGAATAAYARVYEAEHPRLVAYARSLTGN
AWVADDLVAEAHFRVWRRLAAGHEIENVAAYLMTTVRHLAVSVGRAAAKETPHDPQAPWA
PEVVDVTTVADGEGDPAARVSSVDLLTRVLGQLPERWVKALWLAEAEGQPLDAIGRSIGA
GRGATAVLLHRAREGMRQAFLRAHPGAPENPACETHWDRMPAHVRGEATPRQSETLVAHL
DGCPDCRGRLALLTRANHRLPALVGPALLLFVLGGAGKFLAPLAAGAGAGAAAAASSGGS
APGSGGLLHGLRHALTAGGKLPVAVVGAVGTTVAGAAVAAGLVLSGPGHSATPARAVTAE
SGAASRPADAPVGEPEKASDGAPDITVPEPRPGTAAKPNAPGGAAPGRPEAPVPPQARPE
RPADRPAEQPQGPAPVPAARPEPPQPVPPVTRPQPPRPPEPPLAPTPTPPLPPTPTPALA
PTPTPTPTPAPTPTPTEPPSPSPTPTPTPTPTPTQPPEPIPTPTPTPTPTLPPEPTPTPT
PTPVEPTTPPEPTPAPTTGPVCEHWAGPLYICHRP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgggacaggagtgtcctgtcatatccgacgtccctgccgacgtcccccctgaggtcccc
gccgacggcccgcccgaggccgttcccgccgcctccggggcggcgaccgccgcgtacgcg
cgcgtctacgaagccgagcatccgcgcctcgtcgcgtacgcgcgctcactgaccggcaac
gcctgggtcgccgacgacctggtcgccgaggcgcacttccgcgtctggcggcgcctggcc
gccgggcacgagatcgagaacgtggcggcgtacctcatgacgaccgtgcggcacctcgcg
gtgtcggtcgggcgggccgccgcgaaggagaccccgcacgacccgcaggccccgtgggcg
cccgaggtcgtcgacgtcaccaccgtcgccgacggcgagggcgacccggcggcccgggtg
tcctccgtcgacctgctgacgcgggtcctgggccagctgcccgagcgctgggtgaaggcg
ctgtggctcgccgaggcggagggccagccgctcgacgcgatcggccggagcatcggcgcg
ggccgcggcgccacggcggtgctgctgcaccgggcccgcgagggcatgcgccaggccttc
ctgcgcgcccaccccggtgcgcccgagaacccggcctgcgagacccactgggaccgcatg
cccgcgcacgtgcgcggcgaggccacgccccggcagtccgagacgctggtcgcccacctc
gacggctgccccgactgccggggccgcctcgcactgctgacccgcgccaaccaccggctg
cccgccctggtcgggcccgccctgctcctgttcgtcctcgggggcgcgggcaagttcctg
gcgccgctcgcggccggagcgggcgccggggccgcggccgccgcgtcgtccggcgggagc
gcgcccggctccggcgggctgctgcacggcctgcgccacgccctcacggcgggcgggaag
ctgcccgtggccgtcgtcggggccgtcggcacgacggtggccggggccgccgtcgccgcg
ggcctggtcctgagcggcccgggacactcggcgacccccgcccgcgccgtcacggcggag
agcggcgcggcgtcccgtcccgcggacgcgccggtcggggagccggagaaggcgtccgac
ggggcgccggacatcaccgtgcccgagccccggccgggtaccgcggcgaagccgaacgca
ccagggggcgcggcaccggggcggcccgaggcgccggtccctccgcaggcgcggcccgag
cggcccgccgaccggcccgccgagcagccccagggcccggccccggttccggccgcgcgg
ccggagccgccgcagcctgtcccgcctgtgacgcgaccgcagccgccgcgcccgccggag
ccgccgctggctccgacgccaacgccgccgctgcctccgacaccgacgccagcgctggct
ccaacaccgacgcccactcccaccccggccccgaccccgaccccgacagagcctccctcg
ccgtcgcctacgcccacacccaccccgacgccgacccccacgcaacccccggagcccata
cccacacccaccccgacgcccacacccaccctgcccccggagcccacaccgactccgacg
ccgaccccggtcgagcccaccactccccccgagccgacaccggcgcccaccaccggcccg
gtctgcgagcactgggcgggccctctttacatctgccaccgcccctag
DBGET
integrated database retrieval system
