Streptomyces sp. YIM 121038: C9F11_41110
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Entry
C9F11_41110 CDS
T11066
Symbol
dnaE3
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
styi Streptomyces sp. YIM 121038
Pathway
styi03030
DNA replication
styi03430
Mismatch repair
styi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C9F11_41110 (dnaE3)
03430 Mismatch repair
C9F11_41110 (dnaE3)
03440 Homologous recombination
C9F11_41110 (dnaE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
styi03032
]
C9F11_41110 (dnaE3)
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_41110 (dnaE3)
Enzymes [BR:
styi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C9F11_41110 (dnaE3)
DNA replication proteins [BR:
styi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C9F11_41110 (dnaE3)
DNA repair and recombination proteins [BR:
styi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C9F11_41110 (dnaE3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCX81802
LinkDB
All DBs
Position
9717601..9721200
Genome browser
AA seq
1199 aa
AA seq
DB search
MPDSFVHLHNHTEYSMLDGAQKLRPMFAEVARQRMPAIAMSDHGNMFGAYEFAQVAKESD
GIRPIIGIEAYLAPSSRFARKQEFWGPGGRRAVGDGGEGSKDVSGGGRFTHMTMWARNVQ
GLRNLFWLSTRASYEGQFPAGKPRMDRELIAERPDGIIATTGCPSGEIQTRLRLHQYDEA
RAAAAAWQDLFGRENYFLELMDHGLDIERDVRDGLLRLADDLAIPLLATNDAHYVTEDQA
DAHDTLLCIGVGKNKDDPRRFRFNGSGYYLKSATEMRALFAELPQACDNTLLIAERVESY
DEVFDHVDEMPRFPDVPEGETQESWLRKEVARGLVLRYGDPVPAHVMDRFETEMAVIGPM
GFSSYFLVVADICRHARDNRIPIGPGRGSATGSLVAYATRITELCPLEHGLLFERFLNPE
RINPPDVDLDFDDRQRDRMVRYVTEKYGDEYTAFVNTFGTIKAKNAIKDSARILGYPYAH
GERITKALPPDQNGKSAPLAAVFDPAHPRHAEAGGIRQLYDAEADVKRVIDTARGVEGLT
RGTGVHAAAVILSKTRLTDRIPLHMRAADGARITGFDYPSCEAMGLVKMDFLGLRNLGVI
DQAIENVRENRGVRLATVDPGDGDPATVVIPLDDARTYRLLADGNTFGVFQLDGGGMRAL
LKLMEPTRFEDIAAANALYRPGPMAANAHTNYALRQNGKQEPAPIHPELKEALDPILGST
HHLLIFQEQIMAIARQLAGYTLGGADMLRRAMGKKKPEVLAAEWEKFHGGMRANGYSDEA
VKALWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANHPAEYMAALLTSVGDDKDKAAVY
LADARKNGVRVLQPDVNESLAEFTAIGDDVRFGLRSVRNVGDSVIEAVVDARRRKGKFTS
FPDFLDKADLPALSKRAVESLIKAGAFDSLGHSRKGLTAVHEDAIDAITPVKKAAAFGQD
DLFSGATGAQDPQTPSFGLDFPLDPTEWPRRQLLATEREMLGLYVSAHPLDGAEHILAGA
RDRSLADLLASGSSGADVRLSGLVTGVQRKVTKQGNAWAVVHLADRDASVEVLFFPAAYQ
LVQHALAEDNVVSVKGRAEDRDGTLTVFGRELTVLDVSAAEHGGRPPVLLALPSHRVTRR
SVADLKKILAAHPGDSPVHLTVRGPRKTTVYALEARVNAATLASDVKGTFGADAWTGAT
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgactccttcgtccatctgcacaaccacaccgagtactcgatgctggacggcgcc
cagaagctgcggcccatgttcgccgaggtggcccggcagcggatgcccgccatcgccatg
agcgaccacgggaacatgttcggcgcctacgagttcgcccaggtggcgaaggagtccgac
ggcatccggccgatcatcggcatcgaggcgtacctggcgccgtcctcacgcttcgcgcgc
aagcaggagttctgggggccgggcggccgccgcgccgtcggcgacggcggcgagggctcc
aaggacgtctccggcggcggccgcttcacccacatgaccatgtgggcccggaacgtccag
ggcctgcggaacctcttctggctcagcacccgcgccagctacgagggccagttccccgcg
ggcaagccgcgcatggaccgggagctgatcgccgagcgcccggacggcatcatcgccacc
accggctgcccctccggcgagatccagacgcgcctgcgactgcaccagtacgacgaggcc
agggccgccgccgcggcctggcaggacctcttcgggcgcgagaactacttcctggagctg
atggaccacggcctggacatcgaacgcgacgtgcgcgacggcctgctgcgcctggccgac
gacctggcgatcccgctgctcgccaccaacgacgcgcactacgtcaccgaggaccaggcc
gacgcccacgacaccctgctgtgcatcggcgtcggcaagaacaaggacgacccccggcgc
ttccgcttcaacggctccggctactacctcaagagcgccaccgagatgcgcgcgctgttc
gcggagctcccgcaggcctgcgacaacaccctgctgatcgccgagcgcgtcgagtcctac
gacgaggtcttcgaccacgtcgacgagatgccgcgcttcccggacgtccccgagggcgag
acccaggagtcatggctgcgcaaggaggtcgcccggggcctggtcctgcgctacggcgac
ccggtccccgcgcacgtcatggaccgcttcgagaccgagatggccgtcatcggccccatg
ggcttcagctcgtacttcctcgtcgtcgccgacatctgccgccacgcccgcgacaacagg
atccccatcgggcccggccgcggctccgcgaccggctccctcgtcgcctacgccacgcgc
atcaccgagctgtgccccctggagcacggcctgctcttcgagcgcttcctgaaccccgag
cgcatcaacccgccggacgtcgacctcgacttcgacgaccgccagcgcgaccgcatggtc
cgctacgtcaccgagaagtacggcgacgagtacaccgccttcgtgaacaccttcggtacc
atcaaggccaagaacgcgatcaaggactccgcacgcatcctcggctacccgtacgcccac
ggcgagcgcatcaccaaggcgctcccgccggaccagaacggcaagtcggccccgctggcc
gccgtcttcgaccccgcccacccgcgccacgccgaggccggcgggatccggcagctgtac
gacgccgaggccgacgtcaagcgggtcatcgacaccgcacgcggcgtggagggcctcacc
cgcggcaccggcgtccacgccgcggccgtgatcctgtccaagacacggctgaccgaccgg
atcccgctgcacatgcgcgccgccgacggcgcgcggatcaccggtttcgactatccgtcg
tgcgaggcgatgggcctggtcaagatggacttcctggggctgcgcaacctcggcgtcatc
gaccaggccatcgagaacgtccgcgagaaccgcggcgtccggctggccaccgtcgacccg
ggcgacggcgacccggccaccgtcgtgatccccctcgacgacgccaggacgtaccggctc
ctcgccgacggcaacaccttcggcgtcttccagctcgacggcggcggcatgcgggccctg
ctcaagctcatggaacccacccgcttcgaggacatcgcggccgccaacgccctctaccgg
ccgggccccatggccgccaacgcccacaccaactacgcgctgcgccagaacggcaagcag
gagcccgcccccatccaccccgagctgaaggaggccctcgacccgatcctcggctccacc
caccacctgctgatcttccaggaacagatcatggccatcgcccggcagctcgccggatac
acgctgggcggcgccgacatgctgcgccgcgcgatgggcaagaagaagccggaggtcctc
gccgccgagtgggagaagttccacggcggcatgcgcgcgaacggctactccgacgaggcc
gtcaaggccctctgggacgtgatgctgcccttctccggctacgccttcaacaagtcccac
accgccggatacggcctcgtctcgtactggaccgcctacctcaaggccaaccacccggcc
gagtacatggccgccctgctcacctcggtcggcgacgacaaggacaaggccgccgtctat
ctggccgacgcccgcaagaacggcgtccgggtcctgcagcccgacgtgaacgagtccctc
gcggagttcaccgcgatcggcgacgacgtgcggttcggactccggtccgtgcgcaacgtc
ggcgacagcgtcatcgaagccgtcgtcgacgcccgccgccgcaaggggaagttcacctcc
ttccccgacttcctcgacaaggccgatctgcccgccctgtccaagagggccgtggagtcc
ctgatcaaggccggcgccttcgactcgctcgggcactcccgcaagggcctgaccgccgtc
cacgaggacgccatcgacgcgatcaccccggtgaagaaggcggctgccttcggccaggac
gacctgttctcgggggccacgggcgcacaggacccacagacgccgtccttcggcctcgac
ttccccctcgacccgacggagtggccgcgccgacaactcctcgccaccgagcgcgagatg
ctcggcctctacgtctccgcccatccgctcgacggcgccgagcacatcctcgcgggagcg
cgggaccgctccctcgccgacctcctcgcctccggcagctccggcgccgacgtccggctc
tccgggctggtcaccggcgtccagcgcaaggtgaccaaacagggcaacgcctgggcagtc
gtccacctcgccgaccgcgacgcgagcgtcgaggtcctcttcttccccgccgcctaccaa
ctcgtccagcacgccctggccgaggacaacgtcgtctccgtcaagggcagggccgaggac
cgcgacggcaccctgaccgtcttcggccgggagctgacggtgctcgacgtgtccgccgcc
gagcacggcggcaggccccccgtcctcctcgccctgccctcccaccgcgtcacccgacgg
tccgtggccgacctcaagaagatcctcgccgcccaccccggagacagccccgtccacctc
accgtccgcggcccccgcaagaccaccgtctacgccctggaggcgagggtgaacgccgcc
accctcgcctccgacgtcaagggcaccttcggggccgacgcgtggacgggcgccacgtga
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