Streptomyces sp. YIM 121038: C9F11_41520
Help
Entry
C9F11_41520 CDS
T11066
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
styi Streptomyces sp. YIM 121038
Brite
KEGG Orthology (KO) [BR:
styi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
styi03400
]
C9F11_41520 (phrB)
Enzymes [BR:
styi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C9F11_41520 (phrB)
DNA repair and recombination proteins [BR:
styi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C9F11_41520 (phrB)
Prokaryotic type
C9F11_41520 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF3710
Motif
Other DBs
NCBI-ProteinID:
QCX81884
UniProt:
A0A5B7V7L5
LinkDB
All DBs
Position
complement(9800152..9801528)
Genome browser
AA seq
458 aa
AA seq
DB search
MHVSVVLFTSDLRLADHPPLRAALDAADAVVPLFVRDSAVEATGFAAPNRAAFLDGCLAD
LDSALRDRGGRLVVRSGDLVEQVCRVVTQADADEVHMSAGHTRFAARREERLRSALEAAG
RRLFVHDAVTVAVPPGTVTPAASDHFAVFTPYYRQWAQVPLRPVIGTPRGVPVPDGVAGE
KVCARDASSEVSPALPPAGESEARKRVSAYWRRGLGAYEDTRDDLAADATSRFSPHLHFG
TLSPVELVRRAHRHGGPGAEAFVRQLAWRDFHRQVLAARPDAAHADYRTKHDRWRTERTA
ADDIAAWREGRTGYPLIDAAMRQLRHEGWMHNRARLLTASFLTKTLYVDWRVGAEHFLHW
LVDGDVPNNQLNWQWMAGTGTDTRPNRVLNPVTQAKKYDPDGTYVRRWVPELSGVEAPSV
HEPWKLPGLDRAALDYPDPIVELPYGLDRFRQARGKQP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtctcggtcgtcctgttcacctccgacctgcgcctggccgaccatccaccgctg
cgggcggccctggacgcggcggacgccgtggtgccgctcttcgtccgggacagcgccgtg
gaggccaccgggttcgcggcgcccaaccgcgccgcgttcctcgacggctgtctggccgat
ctggactccgcgctgcgtgaccggggcgggcggctcgtggtgcgctccggcgatctggtg
gagcaggtgtgccgggtcgtcacccaggcggacgccgacgaggtgcacatgtcggcgggg
cacacccggttcgccgcgcggcgcgaggagcggctgcgctcggccctggaggcggcgggc
cgtcggctcttcgtgcacgacgcggtcaccgtcgccgtgccgccgggcacggtgaccccc
gccgcgtccgaccacttcgccgtgttcaccccgtactaccggcagtgggcgcaggtgccg
ctgcggccggtcatcggcactccccgcggggtgcccgtgcccgacggggtggcgggcgag
aaggtgtgcgcacgcgacgcgagctccgaggtgtcaccggcgctgccgcccgccggggag
agcgaggcccgcaagcgggtgagcgcgtactggcgccgcggtctgggcgcctacgaggac
acccgcgacgacctggcggccgacgccacctcgcgcttctcgccccatctgcacttcggc
accttgtccccggtggagctcgtgcggcgcgcgcaccgccacggcggtccgggcgcggag
gccttcgtccggcagctggcctggcgcgacttccaccgtcaggtcctcgccgcccggccg
gacgccgcccacgccgactaccgcaccaagcacgaccgctggcgcacggagcgcaccgcc
gccgacgacatcgcggcctggcgcgagggccgcacgggctaccccctcatcgacgcggcc
atgcggcagctgcgccacgagggctggatgcacaaccgggcacggctgctcaccgcgagc
ttcctgaccaagaccctctacgtcgactggcgggtgggcgccgagcacttcctgcactgg
ctggtggacggcgacgtgcccaacaaccagctcaactggcagtggatggcgggcaccggc
accgacacccgtcccaaccgggtcctcaacccggtcacccaggccaagaagtacgacccg
gacggcacgtacgtacggcgctgggtgccggaactctccggcgtcgaggccccgtcggtg
cacgagccgtggaagctgcccggcctggaccgcgcggccctcgactaccccgacccgatc
gtcgagctcccgtacgggctcgaccgcttccggcaggcgcgcggcaagcagccgtag
DBGET
integrated database retrieval system
