Streptococcus pyogenes Alab49 (serotype M53): SPYALAB49_000774
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Entry
SPYALAB49_000774 CDS
T02019
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
stz
Streptococcus pyogenes Alab49 (serotype M53)
Pathway
stz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPYALAB49_000774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stz03019
]
SPYALAB49_000774
Messenger RNA biogenesis [BR:
stz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPYALAB49_000774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF6175
ODP
Motif
Other DBs
NCBI-ProteinID:
AEQ24374
LinkDB
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Position
746679..748340
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AA seq
553 aa
AA seq
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MTDIKMIALGGVREYGKNFYLVEINDSMFILDAGLKYPENEQLGVDLVIPNLDYVIENKD
KVQGIFLSHGHADAIGALPYLLAEVSAPVFGSELTIELAKLFVKSNNSTKKFNNFHVVDS
DTEIEFKDGLVSFFRTTHSIPESMGIVIGTDKGNIVYTGDFKFDQAAREGYQTDLLRLAE
IGKEGVLALLSDSVNATSNDQIASESEVGEEMDSVISDADGRVIVAAVASNLVRIQQVFD
SATAHGRRVVLTGTDAENIVRTALRLEKLMITDERLLIKPKDMSKFEDHELIILEAGRMG
EPINSLQKMAAGRHRYVQIKEGDLVYIVTTPSTAKEAMVARVENLIYKAGGSVKLITQNL
RVSGHANGRDLQLLMNLLKPQYLFPVQGEYRDLAAHAKLAEEVGIFPENIHILKRGDIMV
LNDEGFLHEGGVPASDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVAITVSKKEKRIISK
AKVNTRGFVYVKKSHDILRESAELVNTTVGNYLKKDTFDWGELKGNVRDDLSKFLFEQTK
RRPAILPVVMEVR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattaaaatgattgccttgggaggggtccgtgaatacggaaaaaacttctat
ttggtagaaattaacgattctatgtttattttagacgcagggctcaagtaccctgaaaat
gagcaacttggggtagatttagtcatccccaatttagattatgtaattgaaaacaaagat
aaggtacaagggattttcttgagtcatggccatgctgacgccattggagctcttccttat
ttgttagctgaagtatcagctcctgtatttggatctgaattgactattgaattagccaag
ctatttgtgaaaagtaataacagcactaagaaatttaataattttcatgtggtagacagt
gatactgaaattgaatttaaagatggcctagtttcgttctttagaacaacgcattcaatc
ccagaaagtatgggtattgttattggaacagataaaggaaacattgtttataccggtgac
ttcaaatttgatcaagcagcaagagaaggttatcagacggatttgctacgtttagctgag
attgggaaagaaggggttctagctcttttatcagattcagtcaatgcgacaagcaacgat
cagattgctagcgaatctgaagttggtgaagaaatggacagtgttatctctgatgctgat
ggccgtgtcattgtagctgcagtagcctcaaatcttgttcggattcaacaagtatttgat
tccgccactgcccatgggcgtcgtgttgttttaaccggaacagatgcagaaaatattgtc
agaacagctttacgtctagaaaaattaatgattacggatgagcgtcttttaattaaacct
aaggatatgtctaaattcgaagaccatgaattaatcatccttgaagctggtcgtatgggt
gagccaattaatagcttacaaaaaatggcagcgggacgtcaccgttatgttcaaatcaaa
gaaggagaccttgtttatattgtaacaacaccaagtacggctaaagaagctatggtggcg
cgtgttgaaaacttgatttacaaggccggtggttctgttaaattaatcactcaaaactta
cgcgtttcaggccatgctaatgggcgtgatttgcaactattgatgaatttgttaaaaccc
cagtatctttttccagtacaaggagaatatcgtgatttagctgcccatgcaaagctagct
gaagaagttggtatttttccagagaatattcatattctgaagcgtggcgatatcatggtg
cttaatgacgaaggttttctccatgaaggaggtgtacctgccagtgatgtcatgattgac
ggtaatgctatcggtgatgtgggtaatatcgttttacgagaccgtaaagtcttgtcagaa
gatggtattttcattgttgctattactgtttctaaaaaagaaaaacgcattatttctaag
gctaaagttaatacgcgtggatttgtgtatgtcaagaaaagtcatgatattttaagagaa
agtgcagaattagttaatacaactgttggcaattacttaaaaaaagatacctttgactgg
ggcgaattaaaagggaatgtcagagatgatttgtctaaattcttatttgaacaaaccaaa
aggcgcccagcgattctgccggttgtaatggaagttcgttag
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