Streptococcus pyogenes Alab49 (serotype M53): SPYALAB49_001540
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Entry
SPYALAB49_001540 CDS
T02019
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
stz
Streptococcus pyogenes Alab49 (serotype M53)
Pathway
stz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPYALAB49_001540 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stz03400
]
SPYALAB49_001540 (uvrA)
DNA repair and recombination proteins [BR:
stz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPYALAB49_001540 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPYALAB49_001540 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_22
AAA_21
nSTAND3
AAA_33
AAA_23
NACHT
AAA_18
AAA_14
DUF87
Viral_helicase1
ATPase
BCA_ABC_TP_C
cobW
MMR_HSR1
NB-ARC
NTPase_1
DnaJ_CXXCXGXG
MeaB
PRK
Septin
DUF463
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AEQ25117
LinkDB
All DBs
Position
complement(1488317..1491145)
Genome browser
AA seq
942 aa
AA seq
DB search
MQNKIIIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPY
CINGHGAITASSAEQIVEQVLALPERTRMQILAPIVRRKKGQHKTIFEKIQKDGYVRVRV
DGDIFDVTEVPELSKSKMHNIEVVIDRLVNKDGIRSRLFDSVEAALRLGDGYLMIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLDLVVPDPSKSL
KEGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFEALTEEERDLVLYGSGDREFHFHYV
NDFGGERNIDIPFEGVVTNVNRRYHETNSDYTRNVMRGYMNELTCATCHGYRLNDQALCV
HVGGEEGPHIGQISELSIADHLQLLEELELTENESTIAKPIVKEIHDRLTFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIASGTPKQVAKNKKSITGQYLSGKKFI
PVPLERRSGNGRFIEIKGAAQNNLQSLDVRFPLGKFIAVTGVSGSGKSTLVNSILKKAVA
QKLNRNADKPGKYHSISGIEHIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHY
KEKNIAEVLDMTVDDALVFFSAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKSADH
IIDLGPEGGVGGGQIVATGTPEEVAQVKESYTGHYLKVKLQQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaaataataattcatggggcaagagcccacaatttaaaaaatattgacgtg
gaaattccacgagacaaattagttgtcgtgacagggttatcagggtcaggaaaatctagt
ctagcctttgatactatttatgcggaagggcaacgtcgttacgtagaaagtttatcagct
tatgctagacagttcttgggtaatatggaaaaaccagatgtggattccattgacggtctt
agccctgctatttccattgatcaaaaaactaccagtaagaacccccgctcaacggttggt
acggtgactgaaatcaatgattatttacgtttactatatgcgcgtgtgggcacaccttac
tgtattaatgggcatggggccattacagcatcttctgcagaacaaattgtagaacaggtc
ttagccctccctgaacggacacgcatgcagattttagcgcctattgttcgccggaaaaaa
ggtcaacacaaaaccatttttgagaaaattcaaaaagatggttatgtccgtgtgcgggtt
gatggggatatttttgacgtgacagaagtgccggagctgtcaaaaagtaagatgcacaac
atcgaggtggttattgatcgtctggttaataaggatggtattcgtagccgtttatttgat
tcggttgaagcagctttaaggctgggagatggctaccttatgattgacactatggatggc
aatgaactgctcttttctgagcattattcctgtcctgtctgtgggtttacggttcctgaa
ttagaaccaagactcttctcttttaatgcgccgttcggctcttgtccgacctgtgatggg
ctaggcattaagttggaagtggatttggacttggttgttcctgacccaagtaagtctttg
aaagagggagctttggcgccttggaatcctatttcctccaattattacccaaccatgctt
gagcaagctatggcaagttttggggtggatatggatacaccttttgaggccttgactgag
gaagaaagggatttagttctttatggttcaggggatagagaatttcattttcactatgtg
aatgattttggtggtgagcgtaacattgacattccttttgaaggtgttgtgactaatgtt
aatcgccgttatcacgaaactaatagtgattatacgcgcaatgtgatgcgtggttatatg
aacgaattgacctgtgcgacttgtcatggttaccgtttgaatgaccaagccttgtgtgtg
catgtgggtggcgaagaaggacctcatattggtcaaatttcagaattatcgattgccgac
cacttgcagttgttggaagaactggaactcacagaaaatgaaagtaccattgctaaaccg
attgtcaaagaaattcatgaccgcctgaccttcttaaataatgtgggactgaattatctg
accttatcacgtgctgctgggactttatcaggtggggaaagtcaacgaatcaggttagcg
acacagattggttctaacttatcaggggtgctctatatcttggatgagccttctattgga
ttgcaccaaagagacaatgaccgtttgatcgaaagcctgaaaaaaatgcgtgatttgggt
aataccttaattgtggtagaacacgatgaagacaccatgatgcaggcagactggctgatt
gatgtggggcctggggcaggtgagttcggtggagaaattattgcctctggaacgccgaaa
caagtggctaagaataaaaaatccatcacgggtcaatatttgtctggtaaaaaattcatt
ccagtgccattagagcgtcgttctggtaatggccgattcattgaaataaaaggagcagcg
cagaataatcttcaaagcctcgacgtgagattcccactgggtaaatttattgcggtcaca
ggggtatcaggttcagggaaatcaaccttggttaatagtattttgaaaaaggctgtcgcc
caaaaattaaaccgtaatgctgataagcctggtaaatatcactctatttctggtattgaa
catattgaacgcttgattgacattgaccaaagtccgattggaaggacgccacggtcaaat
ccagccacctatacgggtgtctttgatgatattcgagacttgtttgcccaaaccaacgaa
gctaagattcgtggctacaaaaaaggccgtttctcttttaatgtcaaaggtgggcgttgt
gaggcttgttcaggtgatgggattatcaaaatcgaaatgcactttttgccagatgtttat
gtgccttgtgaggtttgccacggcagacggtataattctgagacgcttgaggtgcattat
aaagaaaaaaatattgctgaagtgcttgacatgactgtcgatgatgccttggtatttttc
tctgctatccctaaaattgctcgaaaaattcaaaccattaaggatgttggtttgggttat
gtgaccttgggtcaaccagctactactctatctggaggagaagcgcagcggatgaaatta
gctagtgaattgcacaaacgctcgacaggtaagagcttgtatatcctagatgagccaacg
actggtttacacacagatgatattgcaaggctattaaaagttttggaacgctttgtagac
gatggcaatacggttcttgtgattgagcataatttggacgttatcaaatctgctgaccat
attattgacttaggaccagaaggtggtgtcggaggtggtcagattgttgctacggggaca
ccagaagaggtagctcaagttaaagaaagctatactggtcattatttgaaagtaaaacta
caacaatag
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