Sulfurimonas autotrophica: Saut_0319
Help
Entry
Saut_0319 CDS
T01316
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sua
Sulfurimonas autotrophica
Pathway
sua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Saut_0319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sua03021
]
Saut_0319
03400 DNA repair and recombination proteins [BR:
sua03400
]
Saut_0319
Enzymes [BR:
sua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Saut_0319
Transcription machinery [BR:
sua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Saut_0319
DNA repair and recombination proteins [BR:
sua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Saut_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
Motif
Other DBs
NCBI-ProteinID:
ADN08368
UniProt:
E0UU59
LinkDB
All DBs
Position
294909..299429
Genome browser
AA seq
1506 aa
AA seq
DB search
MSKLVPVEVTEECRPKDIKQLQFRLASPEKVMSWSHGEVKKPETINYRTLKPERDGLFCA
KIFGPVRDYECLCGKYKKMRYKGVVCEKCGVEVTSTKVRRTRMGHIELVTPVAHIWYVSS
LPSRIGTLLGIKMKDLERVLYYEAYIVESGGEAYYDAEAKTPVLKYDVLNEEQYRTLVQR
FGELGFKARMGGEVIRDLLDSIDLVDLFTNLKEAIGETKSEAKKKTINKRLKVIESFLNS
GNNPAWMMLTVLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNQRLKRLVELEAPEI
IVRNEKRMLQESVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPSLRMDECGLPKKMALELFKPHLIAKLEDKGYATTVKAAKKMIEDKTNEVWE
CLAEIVDGYPIMLNRAPTLHKLSIQAFHPKLIDGKAIQLHPLVCAAFNADFDGDQMAVHV
PLSSAAIAEAKVLMLASMNILLPASGKAIATPSQDMVLGIYYISLEKTGVKGSNKLFANV
DEIRIALEHNALDLHAKVRTRVDGRIIHTTAGRLLIKAILPDFVPAELWNKVMKKKVINE
IVDYVQKHGGIGVTASFLDRLKDLGFKHATEAGVSISADDIRVPDMKPAKIAESKARVIE
IQKQFEAGLLTEQERYNKIIDVWTDTNNTLAAEMMQLVQTDKDGFNSIHMMADSGARGSA
AQIRQLAGMRGLMAKPSGDIIETPIISNFKEGLNVIEYFISTHGARKGLADTALKTANAG
YLTRKLVDVAQNVKIVEHDCHTHEGIEISDIQDQNTLIESLEDRLNGRVLADDVIDPISN
EILYAEGTLLDEVSAKVIAESGIKTAVIRTPTTCKSQEGVCALCYGVNLATGHIVRPGEA
VGIVAAQSIGEPGTQLTLRTFHVGGTASSTAQERQVIAEKEGFIRYYNLKTYKNKEGKNI
VANRRNAGVLLVEPKIKAPFAGTIEIQTIHDEVIISVKSDEETVRYSLRKMEIAKPNELA
GVSGQIEGKYYFPHKNGEHVESLDSIVETIKDGWNVPSRIPYASELLVDDGAPVTKKILA
KEEGTVKYFLLKGDYLERFEGLKSGYEVVEKGLFAAVIDANNREGVRHYIARGSVIVTDD
NESVDRDIVIAKPSSDESVVIAEWDPYSNPIISEANGVVKYEDIIVGTTASEQLDELTGK
TRLMINDHISSEYKPAIVLATEDGELLRYAVEPKSSVFVADGAEVKIADILAKTPKALQK
SSDITGGLPRVSELFEGRRPKATALISEIDGVVSFGKPLRGKVRIIVSNADNGIVKEYFV
DKSHEPVVNPGDFVHAGERLTTGILSSHELLRIMGVKALYNYLVSEVQQVYRSQGVNIAD
KHIEVIFTQMLRQVKIVKSGDTKFIEGDLVSKVKFAQENEKIIRLGGRPAIAEPFLVGIT
CAAVSADSIISAASFQDTTKVLTEAAVSAKVDNLENLKENVIIGRTIPVGTGIYKDQELE
FVSEEE
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattagtaccagtagaagtaacagaagagtgtagaccaaaagatattaaacaa
ctacaattccgtttggcatcacctgaaaaggttatgtcttggagtcacggtgaagttaaa
aaacctgaaactatcaattatcgtactttgaagccggagcgtgatggactgttttgtgca
aaaatattcggacctgtaagagattacgagtgtctttgcggtaaatataaaaagatgcgt
tataagggtgttgtatgtgaaaaatgtggtgttgaagtaacatctacaaaagttcgccgt
actcgtatggggcatattgaacttgtaacaccagtagcacatatttggtatgtaagttca
cttccttcaagaatcggtacactccttggtatcaaaatgaaagatttagaacgtgtactt
tattatgaagcatatattgtagagagcggcggtgaggcatattatgatgctgaagcaaaa
actcctgtacttaaatatgatgttttaaatgaagagcagtaccgtacacttgttcagaga
tttggtgaattaggctttaaagctcgtatgggtggtgaagtaatccgtgatttacttgat
tctattgatttggttgatctgtttacgaacttaaaagaagctatcggtgaaacgaaatct
gaagcgaaaaagaaaacaatcaataagcgtttaaaagttattgagtcatttttaaattca
ggaaacaatcctgcttggatgatgttgactgttttaccagtacttccaccggatttacgt
ccacttgtaagccttgacggcggtaaatttgctgtatctgatgtaaatgatttatatcgt
cgtgtaattaaccgtaatcaacgtctcaagcgtcttgttgagcttgaagcacctgagatt
attgtaagaaatgaaaagcgtatgttgcaagagtctgttgatgcactttttgataatggt
cgtcgtgcaaacgcagttaaaggtgcaaataaacgtccacttaaatctttaagtgaaatt
atcaaagggaagcagggacgtttccgtcaaaacttacttggtaagcgtgttgacttctct
gggcgttctgtaattgttgttggaccatctttaagaatggatgagtgtggattacctaaa
aaaatggctctagagctctttaagccgcatttgattgcaaaacttgaagataaagggtat
gcaacaactgttaaagctgccaaaaaaatgatagaagacaaaacaaatgaagtatgggaa
tgtcttgctgagatcgttgacgggtatccaattatgcttaaccgtgcaccgacacttcac
aaactttctattcaagcgtttcaccctaaacttattgacggtaaggctattcagcttcac
ccgttagtttgtgcggcatttaatgccgatttcgatggggatcaaatggctgttcacgtg
ccgctttcatcagcagcaattgctgaagcaaaggtattgatgctcgcatctatgaatatc
ttacttccagcatctggtaaagctattgcgacaccttctcaggatatggtacttggtatc
tattatatatcattagagaaaaccggtgttaaaggttctaataaacttttcgcaaatgta
gatgagatcagaattgcattagagcataatgcacttgatttacatgcaaaagtaagaaca
cgtgttgatggacgtattattcatacaactgcgggacgtttacttattaaagcaatcctg
ccagattttgttccggctgagctttggaacaaagttatgaagaaaaaagtgattaatgaa
attgttgattacgtgcaaaaacatggtggtatcggtgttacagcatctttcctagaccgt
ctcaaagatttaggtttcaaacatgcgacagaagccggtgtttcaatttcagctgatgat
attcgtgtgccggatatgaaacctgcaaaaattgctgagagtaaagcaagagttattgaa
attcaaaaacaatttgaagccggacttttaactgagcaagaaagatacaataaaattatt
gatgtttggacagatacaaataatacacttgcagcagagatgatgcagcttgttcagact
gataaagacggatttaactctattcatatgatggctgattccggggctcgtggttctgca
gcacaaattcgccagcttgcaggtatgcgtggtcttatggcaaaaccttctggtgatatt
attgaaacaccgattatctctaactttaaagagggtctgaacgtaatcgagtacttcatt
tcaacacacggtgcgcgtaaaggtcttgccgatacagcacttaaaacagcaaatgcgggt
tatttgactcgtaaacttgttgatgttgcacaaaatgtaaaaattgttgagcatgattgc
catacgcacgaaggtattgaaatttctgatattcaggatcaaaatacattgatcgaatca
ttggaagacagactcaacggacgtgttcttgctgatgatgttattgacccgatttcaaat
gaaattctttatgcggaaggaacacttttagatgaagtttctgcaaaagtaattgctgaa
tcaggtattaaaacagcagtaatcagaacaccgactacatgtaaaagccaagagggtgta
tgtgccttatgttatggtgtgaaccttgcaaccggtcatattgttcgtcctggtgaagca
gtcggaattgttgcggctcagtcaatcggtgagcctggtacacagctaactcttagaaca
ttccacgtcggtggaacggcatcatctactgcacaagagcgtcaggtaattgcagaaaaa
gaaggttttatccgttattataatttgaaaacttataaaaacaaagaaggtaaaaacatt
gttgcaaaccgtcgtaatgcgggtgtattattagttgagccgaagataaaagcaccgttt
gccggaactattgagattcaaacgattcatgatgaagtgattataagcgtgaaatctgat
gaagaaacagtacgctattcattacgtaaaatggaaatagcaaaaccgaatgagcttgca
ggtgtaagcggacagattgaaggaaaatactacttcccgcataaaaacggtgagcatgta
gaatcattagattctattgttgaaacaatcaaagacggatggaacgtaccgagtcgtatt
ccatatgcatcagaactattagttgatgacggtgcaccggttacgaaaaaaattcttgca
aaagaagaaggtactgtgaagtacttcttgctcaaaggtgattacctagagagatttgaa
ggattaaaatcagggtatgaagttgtagaaaaaggcctttttgcagctgtaattgatgca
aacaatcgtgagggtgttcgtcactatatcgcgcgtggttcagttattgttacagatgat
aatgaaagcgttgacagagatatagttattgcaaaaccttcatcagatgaatcagttgta
atagctgaatgggatccatattctaatccaattatctctgaggcaaacggtgttgtaaaa
tatgaagacattattgtcggtacaactgcaagtgaacagcttgatgagttgacaggtaaa
acacgtcttatgattaatgaccacatatcttcagagtataagcctgcaatcgtacttgca
acagaagacggtgagcttttacgctatgcggttgagccgaaatcatctgtatttgttgca
gacggtgctgaagtaaaaattgctgacatcttggcaaaaacaccaaaagcattacagaaa
tcatcagatattacagggggtcttccacgtgtatctgagctttttgaaggtcgtcgtcct
aaagctactgcactgatttctgagattgacggtgtagtgagtttcggtaagcctttacgc
ggtaaagtaagaattattgtaagtaacgcagataatggtatagtaaaagagtactttgta
gataaatcacatgagcctgttgtaaatcctggcgattttgttcacgcaggggagagactc
acgaccggtatcttatcttcacatgagcttttacgtattatgggtgtcaaagcactttat
aattatcttgtttctgaagtacagcaagtatatcgctctcaaggggttaatattgccgat
aaacatattgaggtaatctttacacagatgttacgtcaagtaaaaattgtaaaatccggt
gatactaagtttattgaaggtgatttggtttctaaagtaaaatttgcgcaagaaaatgaa
aaaatcattcgtcttggcggtcgtcctgcaattgctgaaccattcttggtcggtattaca
tgtgcggcagtttcagctgactctattatctcagctgcatcattccaagatacgacaaaa
gtattaacagaagctgcagtttcagcaaaagttgataatcttgaaaacttaaaagaaaat
gttattatcggtcgtactattcctgttggaactggtatctataaagatcaagaactagaa
tttgtaagtgaagaagagtaa
DBGET
integrated database retrieval system
