Sulfurimonas autotrophica: Saut_0609
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Entry
Saut_0609 CDS
T01316
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sua
Sulfurimonas autotrophica
Pathway
sua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Saut_0609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sua03021
]
Saut_0609
03019 Messenger RNA biogenesis [BR:
sua03019
]
Saut_0609
Transcription machinery [BR:
sua03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Saut_0609
Messenger RNA biogenesis [BR:
sua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Saut_0609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
Spore_III_AA
OB_RNB
AAA
OB_RNR_1st
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ADN08658
UniProt:
E0UPR6
LinkDB
All DBs
Position
complement(588568..589926)
Genome browser
AA seq
452 aa
AA seq
DB search
MSENASSTQPRKNTKNNNNRNNNSKSRTHTPVKGSSVEELRTKSIGELVDIATKLGVEQP
NELKRQDVIFEILKAQTAQGGYILFSGILEIMQDGYGFIRSIDQSFNESINDAYVSNTQI
KRFALRNGDVVTGQVRPPKDQERYYALIKIEAVNSLPPEESKKRPLFENLTPLYPTEQLK
LEYREKGLTGRMMDLFCPIGKGQRGLIVAPPRSGKTELLKEIAHGITTNHAEVDLMVLLV
DERPEEVTDMERSVKGEVYSSTFDMPAKNHVKVAEMVIEKAKRRVELGRDVVILLDSITR
LARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATALVDTGSRMDE
VIFEEFKGTGNMEVVLDRKIADRRIYPAIDILKSGTRKDELLIGPEVLQKVFILRQMLHK
QDNEVEALKFIYNTMGKKPTNAEFLESMNTNS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatgcatcttctacacaacctcgtaaaaatacaaaaaacaataataacaga
aacaataattcaaaatcaagaacacatacaccggtaaaaggctcaagcgttgaagaacta
cgcacaaaaagtattggtgaacttgttgacattgctactaaacttggagttgaacagcca
aatgagctgaaacgtcaagatgttatttttgaaattttaaaagcccagactgcacaaggc
ggctacattctttttagcggtatcttggagattatgcaagacggctacggatttatccgt
tcaattgatcaaagttttaacgaaagtatcaatgatgcctacgtttcaaacacacaaatc
aagcgttttgctctaagaaacggagatgttgtcacaggtcaggttcgccctccaaaagac
caggaacgctactatgcacttataaaaatagaagcggtaaactcccttccgccggaagag
agtaaaaaacgacctctatttgaaaacttaacaccgctctatccgacagaacaactcaaa
ttagaatatcgtgaaaaaggtcttaccggacgaatgatggatcttttttgtcctattggt
aaaggtcagcgcggtttgattgttgcaccgccaagatctggtaaaacagagcttttaaaa
gagatcgctcacgggataacgacaaatcatgcagaagttgatttaatggttttgcttgta
gatgagcgtcccgaagaggtaactgacatggaaagaagtgttaaaggcgaggtttatagc
tctacttttgatatgcctgcaaaaaaccatgtaaaagttgccgaaatggttatagaaaaa
gcaaaacgtagagtggagcttggtcgtgatgttgttattttacttgattctatcactcgt
cttgcgcgtgcctacaatacggtaacaccttcaagcggaaaagttctctcaggtggtgtg
gatgccaatgcactgcataagccaaaacgtttctttggggcggcaagaaacattgaaaac
ggcggcagtttaacaattattgcgactgctttggttgacactggaagccgtatggatgaa
gttatttttgaagagttcaaaggtactggtaatatggaagttgttcttgatagaaaaatt
gcagatagacgtatataccctgctattgacattttaaaatcaggaactcgtaaagatgaa
cttcttattggtcctgaagtacttcaaaaagtatttattcttcgccagatgttgcataaa
caagacaatgaagttgaagcacttaaattcatttataacactatggggaaaaaacctacg
aatgcagaatttttagagagcatgaacacaaacagctag
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