Sulfurimonas autotrophica: Saut_0716
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Entry
Saut_0716 CDS
T01316
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sua
Sulfurimonas autotrophica
Pathway
sua02020
Two-component system
sua02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Saut_0716
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Saut_0716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sua03021
]
Saut_0716
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sua02035
]
Saut_0716
Transcription machinery [BR:
sua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Saut_0716
Bacterial motility proteins [BR:
sua02035
]
Flagellar system
Flagellar assembly proteins
Stator
Saut_0716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADN08765
UniProt:
E0UQG3
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All DBs
Position
692303..692989
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AA seq
228 aa
AA seq
DB search
MTRNAYVQDLKHKEDELAIQYLPAVKAMAFRLKERLPSSVDFSDLCAIGTEELIKLARRY
DEKLNDSFWGYAKKRVYGAMLDYLRSLDILSRASRKLVKAIDYAVQEYMLTHDEEPSDEE
LAQVLDESVEKIHEARIASSIYTVMPLHDQLQVGDEGAALVQIEKEELITVIKKVLSSYK
EREQMIIQLYYFEELTLKEISSILDITESRISQIHKSVIQKIKESIGA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaatgcgtacgttcaagatttaaaacacaaagaagatgaattggcaattcag
tatcttccggcggtaaaagcaatggctttccggcttaaagagcgacttccgagttcagta
gactttagtgatctttgtgcaattggtacagaagaacttataaaactagcaagaagatat
gacgaaaaactcaatgactctttttggggctatgcaaaaaaaagagtctatggtgcaatg
cttgattatttaagaagcttggatattttaagccgtgcaagccgtaaacttgtaaaagct
atagattacgcagtccaagagtatatgttgacacatgatgaagaaccaagtgatgaagaa
cttgctcaagtgctggatgagagcgtagaaaaaatccatgaagcacgtattgcttcgagt
atttatactgtgatgcctcttcacgatcagttacaggtcggtgatgaaggtgcagctctt
gttcaaattgaaaaagaggaattaatcaccgtgataaaaaaagttctttcttcatataaa
gagagagaacagatgataattcagttatactacttcgaagaattgactttaaaagagata
agtagtattttagatattacagaatcacgtatttcacaaattcataaatcagtgattcaa
aaaatcaaagagagtataggagcataa
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