Sulfurimonas autotrophica: Saut_1934
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Entry
Saut_1934 CDS
T01316
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sua
Sulfurimonas autotrophica
Pathway
sua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Saut_1934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sua03019
]
Saut_1934
03400 DNA repair and recombination proteins [BR:
sua03400
]
Saut_1934
Enzymes [BR:
sua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Saut_1934
Messenger RNA biogenesis [BR:
sua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Saut_1934
DNA repair and recombination proteins [BR:
sua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Saut_1934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
SWI2_SNF2
HHH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADN09977
UniProt:
E0UR21
LinkDB
All DBs
Position
1921054..1922829
Genome browser
AA seq
591 aa
AA seq
DB search
MKNQVLKDNFGHNSFRELQEEGVDAILNAQDLLMILPTGGGKSLVYQLPTMLMDGITIVV
SPLIALMQDQVRALQAQNIAAQMISSAQSYDEVQDIIAMAHNGSLKFLYLSPERLNNGNT
IELLRSLHVNFFVIDEAHCISQWGHEFRDDYRALGNLKHNFPNTAIAAFTATSTDNVTDD
ILRELRLENPLLLKGKVFRKNIFISAQRRISNGHAQLKNFLARHQDESGIIYVSSRKKAE
ELSTFLNVNGYKSLAYHAGLPQHVREQNFKIFVNDKINIMVATIAFGMGIDKSDIRFVVH
MSLPKSQENYYQEIGRAGRDGEDSEVLLLFNAGDMAQHKRFLADITNEEYKTHLDKKIDK
IYKYATSEICFHKQLAEYFNDTLDACKERCDNCLSSDDKRQDITKEAQMILSTIYKTNQG
FGKNYIIDILRSSTEQKILSNGADKLSVYGIGIGLSKKEWFVIVERLLELKILMLGDFNV
LKLTNEAIEILKSQKLVDIKSSRLQINIKEKKIKQEKEFDYDEELFEKLRTKRAELAAEL
GVPAYIIFSDKTLKHLANDMPTNKEEMLEVNGVGEKKFAQFGEKFLDVIKD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
attaaaaatcaagttttaaaagataactttggacacaacagtttcagagaactccaagaa
gaaggtgttgatgccattttaaatgctcaagatttacttatgatactgccaaccggcggc
ggaaaatctcttgtatatcaactcccgactatgcttatggatggcataacgattgtcgtc
tctccgcttatagcactcatgcaggatcaagtccgcgcactgcaggcacaaaatatagct
gctcaaatgataagttctgcacaaagctatgatgaagtgcaagatattattgcaatggcg
cataacggcagtttaaaatttctctatctctctcccgaacgcctcaacaacggcaatacc
attgaattgcttcgctccttacatgtaaacttctttgttatagatgaagcacactgtatt
tcacaatgggggcatgaatttcgagatgattacagagctttgggaaatttaaaacataat
tttccaaataccgcgatagctgcttttacagcaacatcaacggacaatgttacagacgat
atacttagagaactccgccttgaaaatcctctgcttctcaaaggaaaagtatttcgtaaa
aatatctttatctcagcccaaagacgcatcagcaacggacatgcacaactcaaaaacttt
ttagcgagacatcaagatgagagcggtattatttatgtcagttcacgcaaaaaagcagaa
gaactgagcacttttttaaatgtcaacggatacaaatctctagcctatcatgccggactg
ccacagcatgtaagagagcagaattttaaaatatttgtcaatgataaaatcaacattatg
gttgccacaatagcttttggaatgggcatagacaaaagcgatatccgttttgtagtgcat
atgtctttaccaaaatcgcaggaaaactactatcaggagataggacgtgccggacgtgac
ggagaggacagtgaagtgctgcttctttttaatgcaggtgatatggcgcagcacaaaaga
tttttagcagatataacaaatgaagagtacaaaacccacctcgataaaaaaatagacaaa
atctataaatatgcgacaagtgaaatctgttttcacaaacagctcgctgagtactttaat
gacacacttgatgcctgcaaagagcgatgtgacaactgcttgagctctgatgacaaacgc
caagacatcaccaaagaagcacagatgattttaagtaccatctataaaaccaatcagggt
tttgggaaaaactacataatagatattttacgcagttccacagagcaaaaaattctctca
aatggtgctgacaagctctctgtttacggaatcggaataggactgagcaagaaagaatgg
tttgtaattgttgagcgtcttttggaactaaaaattttaatgcttggagatttcaatgtg
ctcaagcttacaaatgaagctatagagattttaaaatcacaaaaactcgtagatattaaa
tcatcaagactacagataaatataaaagagaaaaaaatcaagcaggaaaaagagtttgat
tatgacgaagaactgtttgaaaaacttcgcacaaaaagggcagaattagccgccgaactc
ggtgtacctgcttacatcatttttagcgataaaacactcaaacatcttgcaaatgatatg
ccgacaaataaagaagagatgctcgaagtcaatggagtaggcgaaaagaaatttgcacag
tttggagaaaagtttttagatgttattaaggactaa
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