Sulfitobacter albidus: KDD17_01920
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Entry
KDD17_01920 CDS
T09114
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sual
Sulfitobacter albidus
Pathway
sual03030
DNA replication
sual03430
Mismatch repair
sual03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sual00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDD17_01920 (dnaE)
03430 Mismatch repair
KDD17_01920 (dnaE)
03440 Homologous recombination
KDD17_01920 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sual03032
]
KDD17_01920 (dnaE)
03400 DNA repair and recombination proteins [BR:
sual03400
]
KDD17_01920 (dnaE)
Enzymes [BR:
sual01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDD17_01920 (dnaE)
DNA replication proteins [BR:
sual03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDD17_01920 (dnaE)
DNA repair and recombination proteins [BR:
sual03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDD17_01920 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QUJ76844
UniProt:
A0A975JE68
LinkDB
All DBs
Position
1:416621..420145
Genome browser
AA seq
1174 aa
AA seq
DB search
MTDAPRFIHLRTHSEYSLLEGAMRLKKLPGLCVAAGMPALALTDTNNMFAALEFSVGMSA
AGVQPIIGCQVDLAYLEAAPGERPKPAAPVVLLAQTEAGYENLMRLNTCLYVDKGGALPQ
VTLEELAQNAADVICLTGGPDGPVGRLLRGGQRPAAQALMERLHAIFGDRLYVELQRHPG
EDGAPEAERLSERGFVEMAYAMEIPLVATNDVYFPKSDMYEAHDALICIAEGAYVDQQED
RRRLTPQHSFKSQAEMVALFADLPEAIENTVEIAQRCAFQAYRRDPILPKFADDEVAELR
RQAQDGLRARLAIIPHAAEVSVYEERLEFELGIIEGMGFPGYFLIVADFIKWAKDQGIPV
GPGRGSGAGSLVAYALLITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGRDRVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALA
DEPRLREEARSEEVVARLLEYGQQVEGLLRNASTHAAGVVIGDRRLDALVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVDQIKASGRHLHIAADGTELFVPPEGLE
DDIATIPLDDEASYKLYAAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKERESVHPSIDHILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIAEEMAKERPKFEKGAMENGVEKKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TAWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKRLELPWVPPCVNRSDATFKVVDGA
LVYALGALKNVGVEAMQLIVQGRGEKPFATLFDLARRVDLKRVGKRPLEMLARAGAFDQL
DSNRRRVFGALDALVAYSAAIFEQKASNQVSLFGEAGDDLPEPRIMPCDDWLSAERLTEE
FKAVGFYLSGHPLDDYMGPLKRKHGNDRGVPFMTLDDLTERVTERGAMNARLAGVVAGRQ
ERKSARGNRFAFAQLSDPTGAYEVTLFSDTLELARDHLETGSKVVVTVEATMESDQLKLL
GRSVGPVEMAVADAGGMGLKIYVESPGAIAAVSQVLAGAAQAARNAGRGPVQLCLMDPAL
PGEVEVDLGADFPVTPQIKGAIRSLGGVLEVEEI
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgctccccgattcattcacctgcgcacccattccgaatactccctgctggaa
ggggcgatgcggctgaaaaagctgccgggcctgtgtgtggcggcggggatgcccgcactg
gcgctgacagatacgaacaacatgttcgcggcgctggaattttccgtggggatgtcggct
gcgggggtgcagccgatcatcggctgtcaggtcgatctggcctatctggaggccgcaccg
ggggagcggccaaagcctgccgcaccggtggtgcttctggcgcagacggaggcgggatac
gagaacctgatgcggctcaacacctgcctctacgtcgataaggggggcgcgctgccgcag
gtgacgctggaggagttggcgcagaacgcggcggacgtgatttgccttacgggcgggccg
gacgggcctgtcgggcggcttttgcgcggggggcagcgcccggcggcgcaggcgctgatg
gaacggctgcacgcgatctttggcgacaggctttacgttgaattgcagcgccaccccggt
gaggacggcgcgccggaggccgagcggctgagcgagcgcggatttgtcgagatggcctat
gcgatggagatcccgctggtcgccaccaatgacgtctatttccccaagtccgatatgtac
gaggcgcatgacgcgctgatctgcatcgccgagggcgcctatgtggatcagcaggaggac
cgccgccgcctcaccccgcagcattcgttcaaatcgcaggccgagatggtcgcccttttt
gccgatctgccggaagccatcgagaacaccgtcgagatcgcgcagcgctgcgcctttcag
gcctatcgccgcgatccgatcctgccgaaattcgccgatgacgaggtggcggagctgcgc
cgtcaggcacaggacggcctgcgcgcgcgcctcgccatcatcccgcacgcggcggaggtg
tcggtgtacgaggaacggctggaattcgagttggggatcatcgagggtatggggttcccc
ggctattttctgatcgtggccgatttcatcaaatgggccaaggatcagggcatccccgtg
gggccgggccggggatcgggcgccggatcgctggtggcctacgcgctgctgatcaccgac
ctcgatccgctgcgctattccctgctgttcgagcggttcctgaaccccgaacgtgtgtcg
atgcccgatttcgacatcgatttttgcatggaccggcgcgaggaggtcatccgctacgtg
caggagaaatacggccgcgaccgggtggggcagatcatcacctttggcgcgctgttgtcc
aaggccgcggtacgcgacatcgggcgcgtgttgcagatgccctacgggcaggtggaccgg
ctgtccaagatgatcccggtggagggcgtcaaacccgtcagcatcgaaaaggcgctggcc
gatgagccgcgcctgcgtgaagaggcccgcagcgaagaggttgtcgcgcggctgttggaa
tacggccagcaggtggagggattgctgcgcaacgcgtccacccacgcggcgggggtggtg
attggcgaccgcaggctcgacgcgcttgtcccgctctaccaggatccgcgctccgacatg
cccgccacgcagttcaacatgaaatgggtggagcaggcggggctggtcaaattcgacttt
ctcggcctgaaaaccctgaccgtgatccagaacgccgtcgatcagatcaaggcgtcgggg
cggcatttgcacatcgccgccgacggcacggaattgttcgtgccccccgaggggctggag
gatgatatcgccaccatcccgctggatgacgaggcgtcttacaaactctatgcggcggcc
aagacggtcgcggtattccaggtggaaagctcgggcatgatggatgccctcaaacgcatg
aagcccacctgtatcgaggatatcgtggcgcttgtggcgctttaccggcccggcccgatg
gagaacatcccgacctattgcgaggtgaagaacggcctgaaggaacgcgaaagcgtgcac
ccgtcgatcgaccacatccttgaggaaacgcaaggcatcatcgtttatcaggagcaggtg
atgcagatcgcgcaggtcatggcgggatacagccttggcggggccgacctgctgcgccgc
gcgatgggtaagaagatcgccgaagagatggccaaggaacgcccgaagttcgaaaagggc
gcgatggagaatggggtcgagaaaaagaaagcctccgaggttttcgaccttctggaaaaa
ttcgccaactacgggttcaacaaatcccacgcggcggcctatgccgtcgtcagctaccag
accgcgtggctcaaggcgaaccacccggtcgagttcatggccggggtgatgaactgcgat
atccacctcaccgacaagctggcggtgtatttcgaggaagtgcgcaagcggttggaattg
ccgtgggtgccgccctgcgtgaaccgctccgacgcgacgttcaaggtggtggacggcgcg
ctggtctatgcgctgggtgcgttgaaaaacgtgggcgtcgaggcgatgcagctgatcgtt
cagggaaggggggagaagccctttgccacgctgttcgatctcgcccgccgcgtggatctg
aaacgcgtgggcaagcgcccgcttgagatgctggcccgcgccggcgccttcgaccagctc
gacagcaaccgccgccgggtgtttggcgcgctggatgcgctggtggcctattcggcggcg
atctttgagcagaaggcgtccaatcaggtgtcgctgttcggggaggcgggcgacgacctg
ccggagccgcgcatcatgccttgcgacgactggctgagcgccgagcggctgaccgaggaa
ttcaaggccgtgggcttctacctctcgggccatccgctggacgactacatggggccgctc
aagcgcaagcacggcaacgaccgcggcgtgcccttcatgacgctggacgatctgaccgaa
cgggtgaccgaacgcggcgcgatgaacgcgcggcttgcgggcgtggtcgccgggcggcag
gagcgtaaatcggcgcgcggcaaccgctttgcctttgcgcagctgagcgatccgacgggc
gcgtatgaggtcacgctgttctccgacacgcttgagctggcgcgcgaccatcttgagacc
ggatcgaaagtggtcgtcaccgtcgaggccacgatggagagtgaccagctcaaactgctt
ggccgctcggtcgggccggtggagatggcggtggcggatgcggggggcatggggctgaag
atctatgtcgaaagcccgggcgctattgccgctgtgtctcaggtgttggcaggggccgcg
caggcggcgcgcaatgccgggcgcgggccggtgcagctgtgcctgatggatcccgcgctg
cccggcgaagtcgaggtggatctgggcgccgacttcccggtgaccccgcagatcaagggc
gcgatccgctcgctcggcggggtgctggaggtcgaggagatctga
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