Sulfitobacter albidus: KDD17_09860
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Entry
KDD17_09860 CDS
T09114
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sual
Sulfitobacter albidus
Brite
KEGG Orthology (KO) [BR:
sual00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sual03032
]
KDD17_09860 (topA)
03400 DNA repair and recombination proteins [BR:
sual03400
]
KDD17_09860 (topA)
Enzymes [BR:
sual01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KDD17_09860 (topA)
DNA replication proteins [BR:
sual03032
]
Prokaryotic type
DNA Topoisomerases
KDD17_09860 (topA)
DNA repair and recombination proteins [BR:
sual03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KDD17_09860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
CARME
Motif
Other DBs
NCBI-ProteinID:
QUJ75304
UniProt:
A0A975PL47
LinkDB
All DBs
Position
1:2053245..2056004
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AA seq
919 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGDNFTVLASYGHVRDLPPKDGSVDTDNDFDMLWEIASDSKK
HVKAIADALKDDNELILATDPDREGEAISWHLQEALTKRKSIKKDTPVSRVVFNQITQKA
VTDAMKNPRQVDMPLVEAYLARRALDYLVGFNLSPVLWRKLPGAKSAGRVQSVTLRLIVE
REMEIEAFRPREYWSVKALLTTPSGQEFEARLTELTGKKLDKFDLADATQAEMAVQAVAS
RDLTVTSVEAKPTSRNPSAPFMTSTLQQEASRKFGMGARQTMSTAQRLYEAGHITYMRTD
GIDMAPEAVTMARDAITDRYGSKYVPDKPRVYKNKAKNAQEAHECVRPTDMTKDAGSLSL
KDDDQRKLYDLIWKRTLACQMETARFERTTVEIGSADRQVGLRASGQVMIFDGFLKVYEE
GRDDVSGDDDDKRLPQIDQGDKLGKAPATALRADFDKAEGVVDGDVLDDGDTGGASKGMH
RKSGALLAEGAAVLGSQHHTQPPPRYTEATLVKRMEELGIGRPSTYASIVTTIQDRGYVR
REGQRLIPEDKGRLVTAFLENYFRRYIGYDFTADLEDQLDHVSAGDADYKKVLDRFWRDF
SAAIAETADLRITEVLEKINDVLAPHLFPPTEDGTDPRLCPNCGAGRLSMRTARSGGAFI
GCSNYPECRYTRPFGPPDPEAEASAIPPEGKLLGEDQGDEIRVFKGRFGPYVQRGDVTEE
VKKPPRQSVPKDWEPEELELDRAVMLLSLPREIGPHPEDGVMVWANIGRYGPYLKHAEST
SHKGGTNANLEGIDEVWTVGMNRAVQLLAEKVASRGGRGQAAKPLRELGEHPEVGGPVNV
MKGKYGPYVKWEKINATIPEEVDPEEITMAQAVHLIDERAAKSGKKVAPKKKAAPKKKPA
AKKKPAAKKKPAAKKTSDD
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagttgttgtcgaatctcctgccaaggccaagacgatcaacaaatatctgggg
gataatttcaccgttctcgcctcatacggccacgtgcgggatctgccgcccaaggatggc
tcggtcgataccgataatgatttcgacatgctgtgggagatagcgtcggacagcaaaaaa
cacgtcaaggcgatcgcagatgcgctgaaagacgacaacgaactcatcctcgccaccgac
cccgaccgcgagggcgaagcgatcagctggcacctgcaagaggcgctcacgaaacgcaag
tcgatcaagaaggacacgcccgtcagccgcgtggtgttcaaccagatcacgcaaaaggcc
gtcacggacgcgatgaagaacccgcgccaggtcgatatgccgctggtggaggcgtatctg
gcgcgccgcgcgctcgattatctggtgggcttcaacctctcgccagtgctgtggcgcaag
ctgccgggcgcaaaatccgcgggccgcgtgcaatcggtcaccctgcgcctcatcgtcgag
cgcgagatggagatcgaagccttccggccccgcgaatactggtcggtcaaggcgctgctg
accaccccctcgggacaggagttcgaggcgcggctgaccgagctgaccggcaagaaactc
gataaattcgaccttgccgacgccacgcaggccgaaatggccgtgcaggccgtggcctcg
cgtgatctgaccgtcaccagcgtcgaggcaaagccgacctcgcgcaacccgtcggccccc
ttcatgacctcgaccctgcagcaggaggcgagccgcaaattcggcatgggcgcgcgccag
accatgagcacggcgcagcgcctctacgaggccgggcacatcacctacatgcggaccgac
ggcatcgacatggcgcccgaggccgtgaccatggcgcgcgatgcgatcaccgaccgctac
ggcagcaaatacgtgcccgacaagccgcgcgtctacaaaaacaaggcaaagaacgcgcag
gaggcccacgaatgtgtgcgccccaccgacatgacaaaggacgccggatcgctgagcctc
aaggacgacgatcagcgcaagctctatgatctgatctggaaacgcaccctcgcctgccag
atggaaaccgcgcggttcgagcgcaccaccgtcgagatcggcagcgcagaccgtcaggtc
ggcctgcgcgccagcggtcaggtgatgatctttgacgggtttctgaaggtctatgaagaa
gggcgcgacgacgtctcgggcgacgacgatgacaaacgcctgccgcagatcgatcagggc
gacaagctgggcaaggcgcccgcgacagcgcttcgggcggatttcgacaaggccgaaggg
gtcgtggacggcgacgtgctcgacgatggcgacaccggcggcgcgtccaagggcatgcac
cgcaaatccggcgcgctgctggcagagggcgcagccgtgctgggcagccagcaccacacc
caaccacccccacgctacaccgaggccacgctggtcaaacgcatggaagagctcggtatc
gggcgtccgtcgacctacgcgagcatcgtcaccaccattcaggaccgcggctacgtgcgc
cgcgagggccagcggctgatccccgaggacaaggggcggctggtgacggccttccttgag
aattacttccgacgctacatcggctatgatttcaccgccgatcttgaggatcagctggat
catgtctccgccggggatgcggattacaagaaggtgctggatcgcttctggcgcgatttc
tccgccgcgattgcggaaacggccgatctgcgcatcaccgaagtgctggaaaagatcaac
gacgtgctggcgccgcatctcttcccgccgaccgaggacggaaccgacccgcgcctctgc
ccgaactgcggcgcgggacggctgagcatgcgcaccgcgcgatcgggcggggcgttcatc
ggctgctcgaactaccccgagtgccgctatacccgccccttcggcccgccggatccggaa
gccgaagcctcggccatcccgcccgaaggcaagctgttgggcgaggatcagggcgacgag
atccgcgtgttcaagggccgctttggcccctacgtgcagcgcggcgacgtcaccgaagag
gtcaagaaaccgccgcgccagtcggtcccaaaagactgggagcccgaggagctggagctg
gaccgcgccgtcatgctgttgagcctgccgcgcgagatcgggccacaccccgaggacggc
gtgatggtctgggccaatatcgggcgctacggcccctacctcaagcacgccgagtcgacg
tctcacaagggcgggaccaacgccaatcttgaaggcatcgacgaggtctggaccgtgggc
atgaaccgcgccgtgcagttgctggccgaaaaagtggcgagccgtggcgggcgcggacag
gcggcaaaacccctgcgcgagctgggcgagcaccccgaggtcggcggcccggtcaacgtg
atgaagggcaaatacggcccttacgtgaaatgggaaaagatcaacgcgaccatccccgaa
gaggtcgaccccgaagagatcaccatggcccaggccgtgcatctgatcgacgaacgggcc
gcaaaatccggcaagaaggttgcgcccaagaagaaggccgcgccgaaaaagaaaccggcg
gccaagaaaaaacccgccgccaaaaagaaaccagcggccaagaaaaccagcgacgactag
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