Sulfitobacter alexandrii: BOO69_01930
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Entry
BOO69_01930 CDS
T04555
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
suam
Sulfitobacter alexandrii
Pathway
suam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
suam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BOO69_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
suam03021
]
BOO69_01930
03400 DNA repair and recombination proteins [BR:
suam03400
]
BOO69_01930
Enzymes [BR:
suam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BOO69_01930
Transcription machinery [BR:
suam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BOO69_01930
DNA repair and recombination proteins [BR:
suam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BOO69_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RnfC_N
RPOC_hybrid
DUF7567
Motif
Other DBs
NCBI-ProteinID:
APE42308
UniProt:
A0A1J0WDC4
LinkDB
All DBs
Position
382949..387193
Genome browser
AA seq
1414 aa
AA seq
DB search
MNQELTNNPFNPLTPPKVFDEIKVSLASPERILSWSFGEIKKPETINYRTFKPERDGLFC
ARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELASPVAHIWFLK
SLPSRIGLMLDMTLRDLERVLYFENYVVIEPGLTDLTYGQMMTEEEFMDAQDAYGMDAFT
ANIGAEAIREMLAAIDLEAEADQLREELKEATGELKPKKIIKRLKVVESFLESGNRPEWM
VLTVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVT
GPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIR
EHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQ
LEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYTTLERAGMKGEGKVFGTVDEVQHAL
DAGEVHLHSKIKARIKQIDNEGNEIMVRYDTTPGRVRLGALLPLNAKAPFDLVNRLLRKK
EVQQVIDTVYRYCGQKESVIFCDQIMSMGFKEAFRAGISFGKDDMLIPDSKWGLVEETRE
QVKDFEQQYMDGLITQGEKYNKVVDAWSKCNDKVTEAMMGSISAERLDENGAVMEPNSVY
MMAHSGARGSVTQMKQLGGMRGLMAKPNGDIIETPIISNFKEGLTVLEYFNSTHGARKGL
SDTALKTANSGYLTRRLVDVAQDCIVRMHDCGTEAAITAEAAVNDGEVVSSLAERLLGRV
AAEDILKPGTDEVIVAAGSIVDERMADLIDEAAVQSARIRSPLTCEAEEGVCAMCYGRDL
ARGTLVNQGEAVGIIAAQSIGEPGTQLTMRTFHIGGVAQGGQQSFLEASQEGKIVFEGAQ
TIENANGDVIVMGRNMKLRIVGDDDVERASHKIGYGTTLFVKDGQKVVRGDKLIEWDPYT
LPIIAEKSGTAKFVDLVSGIAVKDETDDATGMTQKIVIDWRAAPKGNELKPEVILVDADG
EPVRTDAGNPVTYPMSVDAILSVEDGNEVKAGDVIARIPREGAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGYVRYGKDYKNKRRIAIESADDPDHRVEYMVPKGKHIPVAEGDFVQ
KGDYIMDGNPAPHDILAIMGVEALADYMIDEVQDVYRLQGVKINDKHIEVIVRQMLQKWE
VQDSGETTLLKGEHVDKQEFDLANEKAIKKGGRPAKGEPILLGITKASLQTRSFISAASF
QETTRVLTEASVQGKKDKLVGLKENVIVGRLIPAGTGGATMQMRKVAQDRDNVVIEARRE
EAEQAARLAAPEADDDVVGGDVFDTVIVDDESRD
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaactgacaaacaacccgttcaacccgctgactccccccaaggtgttcgac
gagatcaaggtctctctggcgtcgccggagcggatcctgtcgtggtccttcggtgagatc
aagaagcccgagacgatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgc
gcgcgcattttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatg
aagtatcgcggcgtcgtctgcgagaaatgcggcgtggaagtcacgctgcagaaggtccgc
cgcgagcggatgggtcacatcgagctggccagccccgtcgcgcatatctggttcctgaaa
tcgctgccgtcccgcatcggcctgatgctggacatgacgctgcgtgatctggagcgcgtg
ctctacttcgagaactacgtggtgatcgaaccgggcctgacggacctcacctacggtcag
atgatgaccgaggaagagttcatggacgcccaggacgcctatggcatggacgccttcacc
gccaacatcggtgcggaagccatccgcgagatgctggccgcgatcgacctcgaggcagag
gccgaccagctccgtgaggagctgaaggaagccaccggcgagctgaagcccaagaagatc
atcaagcgcctgaaggtcgtggaatccttcctcgaatccggcaaccgcccggagtggatg
gtcctgaccgtgatcccggtcatcccgccggaactgcgcccgctggtgccgctggacggt
ggccgcttcgcgacctccgacctcaacgacctgtatcgccgggtcatcaatcggaacaac
cgcctgaagcggctgatcgagctgcgtgcgccggacatcatcgtgcgcaacgagaagcgg
atgctgcaggagtccgtcgacgccctgttcgacaacggccgtcgcggccgcgtcatcacg
ggtgcgaacaagcgcccgctgaagtcgctgtcggacatgctgaaaggcaagcagggccgc
ttccgccagaaccttctgggcaagcgggtcgacttctcgggccgttcggtcatcgtgacc
gggccggaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttc
aagccgttcatctattcgcggctggaggccaaggggctgtccagcaccgtgaaacaggcc
aagaagctggtggaaaaggaacgtcccgaggtctgggatattctggatgaagtcatccgc
gagcaccccgtcatgctgaaccgtgcgccgacgctgcaccgcctgggtatccaggcgttc
gagcccgtgctgatcgaaggcaaggcgatccagcttcacccgctggtctgctcggccttc
aacgcggacttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaagcgcag
ctggaagcgcgtgttctgatgatgtcgacgaacaacgtcctgtcgcccgccaacggtgcg
ccgatcatcgtgccgtcgcaggacatgatcctcggtctttactacaccactctggaacgc
gcgggcatgaagggcgaaggcaaggtctttggcaccgtggacgaggtgcagcacgcgctc
gacgcgggcgaggttcacctgcactccaagatcaaggcccggatcaagcagatcgacaac
gagggcaacgagatcatggtccgctatgacacgacccccggtcgcgtcaggctgggcgcg
ctgctgccgctgaacgcgaaggcaccgttcgacctcgtgaaccgtctgctgcgcaagaag
gaagtgcagcaggtcatcgacaccgtctatcgctactgcggccagaaggagtcggtcatc
ttctgcgaccagatcatgtccatgggtttcaaggaagctttccgcgccggcatcagcttc
ggcaaggacgacatgctgatccccgacagcaagtggggcctcgttgaggagacccgcgag
caggtcaaggatttcgagcagcagtacatggacggcctgatcacccagggcgagaagtac
aacaaggttgtcgacgcctggtcgaagtgtaacgacaaggtgaccgaggccatgatgggc
tcgatctcggccgagcggctggatgaaaacggtgccgtcatggaaccgaattcggtctac
atgatggcccactccggtgcgcgtggctcggtcacgcagatgaagcagctgggcgggatg
cgcggcctgatggcgaagccgaacggcgacatcatcgagaccccgatcatctcgaacttc
aaggaaggtctgaccgttctcgagtacttcaactcgacccacggtgcgcggaaaggtctg
tcggatacggcgctgaaaaccgcgaactcgggctacctgacgcgtcgtctggtggacgtg
gcgcaggactgcatcgtgcgcatgcacgattgcggtaccgaagctgcgatcaccgccgaa
gcggcggtcaatgatggcgaggtcgtgtcgtcgctggccgagcgcctgctgggccgtgtc
gccgcagaggatatcctcaagcccggcacggacgaggtgatcgtggccgctggttccatc
gtggacgagcggatggcggacctgatcgacgaggcggcggttcagtccgcgcgcatccgg
tccccgctgacgtgcgaggccgaggaaggcgtctgcgcgatgtgctacggtcgtgacctt
gcacgcggcactcttgtcaaccagggcgaggctgtcggcatcatcgcggcgcaatccatt
ggcgaaccgggcacccagctgacgatgcggacattccacatcggcggcgtggcgcagggc
ggtcagcaatccttcctcgaggcttcccaggagggcaagatcgtgttcgaaggggcgcag
acgatcgagaacgccaacggcgacgtgatcgtgatgggccggaacatgaagctgcgtatc
gtcggtgatgacgacgtcgagcgggccagccacaagatcggctatggcaccaccctgttc
gtcaaggacggccagaaggtggttcgcggcgacaagctgatcgagtgggatccctacacg
ctgccgatcatcgccgagaagtcgggcacggccaagttcgtcgaccttgtcagcggcatc
gccgtcaaggacgagaccgacgacgcgaccggcatgacccagaagatcgtgatcgattgg
cgcgcggcgccgaaaggtaacgagctgaagccggaagtgattctggtggatgccgacggc
gagccggtccgtacggatgcgggcaacccggtgacctatccgatgtcggtggacgcgatc
ctgtcggtcgaggacggcaacgaggtgaaggccggcgatgtcatcgcccgtatcccgcgc
gaaggcgccaagaccaaggacatcaccggtggtctgccgcgtgtggccgaactcttcgag
gcacgccgcccgaaggaccacgccatcatcgcggaaatcgacggttatgtccggtacggc
aaggactacaagaacaagcgccgtatcgcgatcgagtccgcggacgatccggatcaccgg
gtcgagtacatggtgcccaagggcaagcacattccggttgcggaaggtgacttcgtgcag
aagggcgactacatcatggacggcaacccggcgcctcatgacatccttgcgatcatgggt
gtcgaggccttggcagactacatgatcgacgaggtgcaggacgtctaccgcctgcagggc
gtgaagatcaacgacaagcacatcgaggtgatcgtgcgccagatgctgcagaagtgggag
gtccaggattcgggcgaaaccacgctgctgaagggcgaacacgtcgacaagcaggagttc
gatctggccaacgagaaggcgatcaagaagggcggtcgtccggccaagggcgaaccgatc
ctgctgggcatcacgaaagcctcgctgcagacccggtcgttcatctcggctgcgtccttc
caggaaaccacgcgcgtgctgaccgaggcttcggttcagggcaagaaggacaagcttgtc
ggtctgaaggagaacgtgatcgtgggtcgcctgatcccggcgggtacgggcggtgcgacc
atgcagatgcgcaaggttgcacaggaccgtgacaacgtggtcatcgaagcacgccgcgaa
gaggcagagcaggccgcgcgcctcgccgcgcccgaagcggacgacgacgtggtcggcgga
gatgtcttcgacaccgtgatcgtggacgacgaaagccgcgattga
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integrated database retrieval system
