Streptococcus uberis: SUB0257
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Entry
SUB0257 CDS
T00849
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sub
Streptococcus uberis
Pathway
sub03030
DNA replication
sub03430
Mismatch repair
sub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUB0257 (polC)
03430 Mismatch repair
SUB0257 (polC)
03440 Homologous recombination
SUB0257 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sub03032
]
SUB0257 (polC)
03400 DNA repair and recombination proteins [BR:
sub03400
]
SUB0257 (polC)
Enzymes [BR:
sub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUB0257 (polC)
DNA replication proteins [BR:
sub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SUB0257 (polC)
DNA repair and recombination proteins [BR:
sub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SUB0257 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
Rv2179c-like
HHH_3
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAR40776
UniProt:
B9DTD3
LinkDB
All DBs
Position
249625..254022
Genome browser
AA seq
1465 aa
AA seq
DB search
MSDLFVKLMEQIEMPLEMRTSSAFSTADIIEVKVHSVSRLWEFHFQMAEILPIAIYKELD
YRLKTTFEQADIKAVFDIKAESVDYSDDLLQAYYQEAFEHAPCNGASFKSTFSKLKVRYE
DGKLQIATPQFVNNDHFRKNHIPNLAKQMEAFGFSLIEIEMVPDEEMTQVLKENFTTSRK
ALLEKAVQETLEAQKSLEAMQPPAEEVTSKPVFDYKERVAQRQAGFEKAEITPMIEIETE
ENRIVFEGLVFDVERKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELRKYDLVAKGAWL
RVQGNIENNPFTKSLTMNVQQIKEIVHHERKDLMPEGQKRVELHAHTNMSTMDALPTVET
LIDTAAKWGHPAIAITDHANVQSFPHGYHRARKAGIKAIFGLEANIVEDKVPISYQPVSM
DLHEATYVVFDVETTGLSAMNNDLIQIAASKMYKGNIIEQFDEFIDPGHPLSAFTTELTG
ITDNHLIGAKPLLQVLEEFQAFCHDTVLVAHNASFDIGFMNANYERNGLPQITQPVIDTL
EFARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAREKHGVTDLL
DLNIKLVAEDSYKKARIKHATIYVQNQTGLKNIFKLVSLSNVKYFEGVPRIPRTVLDQYR
DGLLLGSACSEGEVFDAVLTKGVEAATEVAKYYDFIEIMPPAIYQPLIAKELIKDQEGVQ
QTILDLIEVGRRLNKPVIATGNVHYIEPEDEIYREIIVRSLGQGAMINRPIGRGEAAQPA
PLPKAHFRTTNEMLDEFAFLGKDLAYQVVVQNSQDFADLIEEVEVVKGDLYTPFIEKAEE
TVAELTYQKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSVGSGYDLPNKNCPQCGSPY
QKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPNAHLDVRDIFGEEYAFRAGTVGTVAEK
TAYGFVKGFERDYGKYYRDAEVDRLAAGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQY
PAEDVTASWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKSIPADDPGVMA
LFSGTDILGVTPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGMWLKISEDERN
SYIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIMYYCAYFSIR
AKAFELKTMSGGLDAVKSRMEEIALKKKNNEASNVENDLYTTLEIVNEMLERGFKFGKLD
LYKSDAIEFQIEGDTLIPPFVALEGLGENVAKQIVKARQDGEFLSKMELRKRGGASQTLV
EKMDDMGILGNLPEDNQLSLFDDFF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttattcgttaaactaatggaacaaatagaaatgccacttgaaatgcgaact
tcaagtgctttttcgactgctgacattattgaagtaaaggttcattccgtctctcggctt
tgggaatttcatttccaaatggcagaaatcttaccaattgctatttataaagagttagac
tatcgtctcaaaacgacctttgaacaggccgacattaaagcggtttttgatataaaggca
gaaagcgttgattattcagatgatctcttgcaagcctactatcaggaggcttttgaacac
gctccctgtaacggtgcctcctttaaatcgactttttcaaaactcaaggtacgttatgaa
gacggaaaattacagattgccacacctcaatttgttaacaacgatcattttcgcaagaac
cacattcccaatttagccaaacaaatggaagcctttggctttagcctcatagaaattgaa
atggttcctgatgaagagatgactcaggttttaaaagagaactttaccaccagccgtaaa
gctcttttggaaaaagcggtgcaggaaaccttggaagcacagaaatccttggaagctatg
caacctcccgctgaagaggtgacaagtaagccggtcttcgactataaagaaagagtggca
caaagacaagcaggtttcgaaaaggcagaaatcacgccgatgatcgaaatcgaaacagaa
gaaaatcgcattgtttttgagggcttggtttttgatgttgaacgcaaaaccactcgtacg
ggtcgtcatatcatcaattttaaaatgacggactatacctctagttttgccatgcaaaaa
tgggcaaaagacgatgatgaactccgtaaatatgatttggttgctaaaggcgcctggttg
cgagttcaggggaatatcgaaaacaatccctttaccaagagcctaaccatgaatgtgcaa
caaatcaaagaaattgtgcatcatgagcgtaaggatttaatgcctgaagggcaaaaacgt
gtggaattacatgctcataccaatatgtcaaccatggatgctttacctactgttgaaact
ttaattgatacagcagccaaatggggacatccagccatagcaatcactgatcacgctaat
gtgcaatcttttcctcatggttaccatagagctcgaaaagctgggattaaagccattttt
ggactagaggccaacattgttgaagataaggttcctatttcttaccaaccagtttcaatg
gatttacatgaagccacttatgttgtctttgacgtggagaccacaggtctgtcagcaatg
aataacgatttgattcagattgcggcttcaaaaatgtataagggcaatattattgaacaa
ttcgatgaatttattgatccggggcacccattgtctgcttttacaacggaattaacgggg
attacagacaatcatctgattggtgctaaacccttgttacaggttctggaagaattccaa
gctttctgtcacgacactgtcttagtggcccataacgcaagctttgatattggctttatg
aatgccaattacgagcgtaatggcttgccacaaattacccaaccggtcattgatactttg
gagtttgcgagaaacctttatccagaatacaaacgtcatggtttaggtccattaaccaaa
cgtttccaagtttcattggaacatcaccacatggctaactatgatgcggaagccacggga
cgtttgctctttatcttcttgaaagaagctagagaaaaacatggtgtcaccgatcttttg
gatttaaacatcaagcttgtggcagaagattcttataaaaaagccagaattaagcatgca
acgatctatgtccaaaaccaaacgggcttaaaaaacatctttaaactggttagtttatca
aatgttaagtattttgaaggtgttccaaggattcctcggacggttttagaccaataccga
gatggattattactgggttcagcttgttctgagggggaagtatttgacgccgtgctaacc
aagggggttgaagctgcgacggaagttgctaagtactatgacttcatagaaatcatgcct
ccggcaatttaccaaccccttattgctaaagaattaatcaaagatcaagaaggtgttcaa
caaactatcttggatttgattgaggttggtcgtcgcttgaacaagcccgttattgcgact
gggaatgtccattatatcgaacctgaggatgagatttaccgcgaaattattgttcgttca
ctgggtcaaggtgctatgattaataggccgattggtcgaggggaagcggcacaaccagct
cctttaccaaaagctcattttaggaccacaaatgaaatgttggacgagtttgccttttta
ggaaaagatttggcttatcaagtggtggttcaaaattcgcaagattttgctgatctcatt
gaagaagtggaagtggttaaaggtgatctttacacgccatttattgagaaagctgaagaa
acagttgcggagttgacttatcagaaagcctttgaaatttatgggaatcctcttcctgat
attattgaccttcgtattgaaaaagaattaacctcaatcttgggaaatggcttcgcggtg
atttacttggcttctcaaatgttggttaatcgttccaatgaaagaggttatttggttggt
tctagggggtctgtcgggtcaagttttgttgcgaccatgattggaataacagaagtcaat
ccaatgcctcctcattatgtctgtccaaattgccagcattcagaattcattacggatggt
tccgtcgggtcaggctatgatttacccaataaaaattgcccgcaatgtggcagtccttat
cagaaagatggtcaagatatcccatttgaaaccttcctagggtttgacggggataaggta
cctgatattgatttgaacttttctggtgatgaccaacccaatgcccacttagatgttcgt
gatatttttggcgaagagtatgctttccgtgccggaactgttggtacggttgccgagaaa
accgcttacggcttcgtaaaaggttttgaacgtgactatggaaaatactaccgtgatgca
gaagtcgatcgtctagctgccggtgcggctggtgtcaaacgaacaacaggtcagcacccg
ggtggtatcgttgtaatccctaactatatggatgtttatgactttacaccagtacaatac
cccgccgaagacgtcacagcttcttggcagacaacccactttaacttccatgatattgat
gaaaacgtcttaaaactcgatattctgggtcatgatgatcctaccatgatacggaaatta
caagatttatctggtattgatcccaagtctattccggcagatgatcctggtgtcatggca
ttgttttcgggtactgacattttaggcgttaccccagaacaaatcggaacaccaactgga
atgcttggtattcccgaatttggaaccaacttcgtccgtggaatggttaatgaaacgcat
ccaaccacttttgccgaattgctgcaattgtcaggtttgtcacacggaacggatgtttgg
ttaggaaatgctcaagatttgatcaaagaggggattgctaccctaaaaacagttatcggt
tgtcgggatgacatcatggtttatttgatgcacgcgggcttagaaccgaaaatggccttc
accatcatggaacgggtgcgtaagggcatgtggttgaaaatttctgaagatgaacgcaat
tcctatattcaagccatgcgggaaaacaatgtccccgattggtatattgaatcctgtgga
aaaattaaatacatgttccctaaagcccatgcagctgcttatgtcttgatggctttgcgc
gtggcttactttaaagtacaccacccaatcatgtactactgtgcttatttctctattagg
gcaaaagcttttgaattaaaaaccatgagtggaggcttagatgccgtcaaatcacgcatg
gaagagattgcactgaaaaagaaaaataatgaagcgtctaacgttgaaaatgacctctat
accaccttggaaattgtcaatgaaatgttggaaagaggcttcaaatttggcaaattagat
ctttataagagtgatgccattgaatttcaaattgaaggagataccttaatcccaccattt
gttgctttagagggccttggggaaaatgtggccaaacagattgttaaggctcgtcaagat
ggtgaatttctctccaaaatggaattacgcaaacgtggcggtgcctctcaaaccttagtt
gaaaaaatggatgacatgggtatattaggaaaccttcctgaagataaccaattgagtttg
tttgatgatttcttttaa
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integrated database retrieval system
