Streptococcus uberis: SUB0345
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Entry
SUB0345 CDS
T00849
Symbol
csdB
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
sub
Streptococcus uberis
Pathway
sub00450
Selenocompound metabolism
sub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SUB0345 (csdB)
Enzymes [BR:
sub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SUB0345 (csdB)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SUB0345 (csdB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
SelA
Motif
Other DBs
NCBI-ProteinID:
CAR40930
UniProt:
B9DTL5
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All DBs
Position
341709..342935
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AA seq
408 aa
AA seq
DB search
MINSQELKKDFPILDQLVHDEGYTYLDNAATTQKPKQVLDRIRRYYDYDNANVHRGVHTL
AERATRDYEASRQKVANFINANSSKEIVFTRGTTTSLNWVAQFAKQILKPGDEVLISIME
HHANLIPWQEVCRQTGASLVYAYLKEGTLDLDDFKAKVTSKTRFVCMAHVSNVLGCVNPI
QEITAIAHGVGAYMVVDGAQSVPHMAVDVQALNCDFLAFSGHKMLGPTGIGVLYGKEEVL
KLMDPVEFGGEMIDFVYEQEASWKSLPWKLEAGTPNIAGAIGLAAAIDYLESLGMSAIQN
HERELVSYILPKLQAIDGLKLYGPGNPMDQTGVLSFNLDGLHSHDVATALDYEGIAVRAG
HHCAQPLLRHLGISAAVRASFYIYNTKEDCDRLVEAILKTKEFFSGTL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgataaatagtcaagaactcaaaaaagactttccaatattggatcaattggtgcatgat
gaaggttatacctaccttgataatgcagcaacaactcaaaaacctaagcaagttttagat
aggattcgtaggtattacgattatgacaatgcgaatgttcacaggggggtccatacgcta
gcagaaagagcaacgcgagattatgaggccagccgtcaaaaagtagctaactttatcaat
gccaatagtagcaaagaaattgtgttcacccgtgggacaacaaccagtctcaactgggtg
gctcaatttgccaagcaaatcctaaaaccaggagatgaagtcttgatttccattatggag
caccatgctaatcttatcccttggcaagaggtctgtcgacaaacgggtgcttcattggtt
tatgcttatctcaaagagggaactctagatttggatgatttcaaggcaaaagtcacctcc
aaaacgcgatttgtttgtatggctcatgtctctaatgtactagggtgtgtcaatcctatt
caagaaataacagccatcgcccatggtgttggagcttatatggttgttgatggtgcgcaa
tcagttcctcatatggcagtcgatgtccaagcgttaaactgcgacttcttagctttctca
ggtcataaaatgttgggcccaacaggtattggtgttttatatggaaaagaagaagtcttg
aaactcatggaccctgttgagtttggtggggagatgattgattttgtttatgagcaagaa
gcttcctggaaaagcttgccctggaaactagaagctggcactcctaatattgcgggtgcc
atagggcttgctgcagctattgattatttagaatcacttggcatgtcagctattcagaat
catgaaagagaactggtttcgtatattctaccgaaattacaagccattgatgggcttaaa
ctatatggtccgggcaaccctatggaccaaacaggtgttctttccttcaacttggacggt
ttacactcccacgatgtcgcgactgctttagattacgaaggaatagccgttagagctggc
catcattgtgcccaacccttattgcggcatttgggaatttcggctgcggttagagccagt
ttctacatctacaataccaaggaagattgtgatcgtttagttgaggcgatccttaaaaca
aaggagttttttagtggcactctctaa
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