Streptococcus uberis: SUB1002
Help
Entry
SUB1002 CDS
T00849
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sub
Streptococcus uberis
Pathway
sub03030
DNA replication
sub03430
Mismatch repair
sub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUB1002 (dnaE)
03430 Mismatch repair
SUB1002 (dnaE)
03440 Homologous recombination
SUB1002 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sub03032
]
SUB1002 (dnaE)
03400 DNA repair and recombination proteins [BR:
sub03400
]
SUB1002 (dnaE)
Enzymes [BR:
sub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUB1002 (dnaE)
DNA replication proteins [BR:
sub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SUB1002 (dnaE)
DNA repair and recombination proteins [BR:
sub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SUB1002 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
CAR42236
UniProt:
B9DSA5
LinkDB
All DBs
Position
complement(978414..981518)
Genome browser
AA seq
1034 aa
AA seq
DB search
MFVQLDTKTVYSFMDSLIDLESYFSKAKELGYSSIGIMDKDNLYAAYHFIKGCERHGLQA
ILGLEIDYHISDQFIPIFLIAKNNLGYQNLLKLSTQIMSSENVQRHFKEYLDGLEVIIPY
FKHMEEIAFPFEYYIGVYEDTEFPHSHKKLIPLRTVRYFEDEDRQTLQVLHAIRDNVSLN
ETAIVEGDQKFEDSQKISTIFETRFPGSIERLNKLVSGIHYQFDNQFKLPRFNREVPAKE
QLYALTKEGLEKRGLWQDNYISRLHHELTIISEMGFEDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVAFALEITGIDPVKNNLLFERFLNNERFSMPDIDIDLPDIYRMEFLRYVRNR
YGTNHSAQIVTFSTFGPKQALRDVLKRFGVPEYEISHLTKKIGFKDSLHSVYDNNISFRQ
TIASRLEYQKAFDIAKRIEGNPRQTSIHAAGIVMSDSNLTDFIPLKQGDEMMITQYDAPS
VEANGLLKMDFLGLRNLTFVQKMKEKVAKDFGKNIIIEEIDLEDPKTLELFAKGDTKGIF
QFEQSGAISLLKRIKPVKFEEIVATTSLNRPGASDYTSNFIKRRNGKETIDLIDPIIAPI
LEPTYGIMLYQEQVMQIAQVFAGFSLGKADLLRRAMSKKKISEMKKLESEFLEGARALGR
SEETAKLLFNRMEKFAGYGFNRSHAYAYSALAFQLAYFKVHYPSVFFDVIMNYSTSDYIS
DALDSEFNVVPLSINSIPFNDKVEGRTILMGMKNIKHLPRDLAYWIIEARPFTSIENFLT
QLPDKYQKKEILEALISVGLFDVFEKNRKKVLQNYEGLLVFVKELGSLFADSSFNWTECE
DFSSSEKYRMEEEYIGIGLSQHPLLEIAEKTSRDFTPISKLYKDTDVTLLVQIEKVRVIR
TKSNGQQMAFLTVTDTKKKCDVTVFPEQFSKVHSLLVEGQMVFIQGRVKERDGRLQVVLE
NIEMASSKNFWLLVESHENDKMIASILRRHPGDFPVIIHYKESKETLKIPGILVRVSEDL
ESELKDFVLKTVYR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacaactcgatacgaaaactgtatacagctttatggatagtctaatagattta
gaaagctatttttctaaggcgaaagaattgggctatagcagtattggtattatggataaa
gacaatctctatgctgcttatcattttatcaaaggctgtgaacgtcatggacttcaggct
atccttggactagaaattgactatcacatcagtgatcaattcattcccatatttttaatt
gctaaaaataatttgggttaccaaaacctcctgaaattatccacacaaatcatgtcttcc
gaaaatgtccaaaggcattttaaggaatatttagatggtttggaagttatcattccctat
tttaaacatatggaagaaatagcatttccatttgagtattatattggggtttacgaagat
acagaattcccacattctcataaaaagcttattccattaagaacagttcgttatttcgaa
gatgaagaccgtcagacattgcaagtgttacacgcaataagagataacgttagtcttaat
gaaacagcaattgttgaaggagatcaaaagtttgaagatagtcagaagatttctactatt
tttgaaacacggtttccaggttcaattgaaaggctaaacaaactggtttcggggattcat
taccaatttgataatcaatttaagttaccacgatttaatcgcgaagttccagcaaaagag
caattgtatgccttaaccaaagaaggacttgaaaaaagaggattgtggcaagataactat
atcagtcgcttacatcatgaattaaccattatctccgaaatgggatttgaggactatttt
ttaattgtctgggatttacttcgttttggaagaagtaaaggctactacatgggaatggga
cgaggttcagctgcagggagtttagttgcctttgcattggaaattactggaattgatcct
gtcaaaaataacttgctctttgaacggtttttaaacaatgaacgctttagcatgcctgat
attgatattgacttaccggatatttatcgtatggaatttttaagatatgttcggaatcgg
tatggtacaaatcattcagcacagattgtaaccttctcaacgtttggtccaaaacaagcc
ttaagagatgttctaaagcgttttggagtacctgaatacgagattagtcatctgaccaag
aaaatcggatttaaagattcacttcattctgtctatgataataacatcagttttagacag
accatcgcgagtcgattagagtatcaaaaagcttttgacattgctaaacgtatagagggt
aaccctcgtcaaacgtccattcacgctgctgggattgtcatgagtgatagtaacctaaca
gattttatccctttaaaacaaggggatgaaatgatgatcacccagtacgatgcaccttca
gttgaagctaatggtctcttgaaaatggactttttaggtcttcgtaacttaacttttgtt
caaaaaatgaaagaaaaagttgccaaagattttgggaaaaacatcattattgaagagatt
gacttggaagatccaaagacattagaactctttgccaagggtgataccaaagggattttt
cagtttgaacaaagcggtgccatcagtttattgaaacggataaaacctgttaagtttgaa
gaaatcgttgcaacaacgagtttgaacaggccaggggctagtgattataccagtaatttt
atcaagcgtcgaaatggaaaagaaaccattgatttaatcgatccgataattgctcctatt
ttagaaccaacttatggcattatgctatatcaagaacaggtgatgcagattgcacaagtc
tttgcaggttttagcctaggcaaagccgatcttttacgccgtgctatgtccaaaaagaaa
atttctgaaatgaagaagttagagtctgaatttttggaaggtgcaagagctttaggaaga
tcagaagaaacagctaaactcctttttaatcgcatggaaaagtttgcagggtacggtttt
aataggagtcatgcctatgcatattcagcactagcatttcaactggcatatttcaaggtc
cattatccatctgttttctttgatgtgattatgaattattcgacaagtgattacatcagt
gatgcccttgattctgagtttaacgttgtgcctttatccattaattctattccattcaac
gataaggtggaaggcagaaccatcttaatgggaatgaaaaatattaagcatcttcctcgt
gatttggcttattggatcattgaagctaggccatttacaagtattgagaatttcttgacc
caactgcctgacaaataccagaaaaaagagatattagaagcgcttatctctgtaggtttg
tttgatgtttttgaaaaaaaccgtaaaaaagttttacaaaattatgaaggtttacttgta
tttgttaaagaacttggttcattatttgctgattcttcttttaattggacggaatgcgaa
gatttttcgagtagtgaaaaatatcgaatggaagaggagtatattggtattggattaagt
caacatcccttgttggagattgctgaaaaaacctctagagactttacgcctatttcaaaa
ctctataaagatacagatgtgacattgctggtgcaaattgagaaagtaagagttattcga
actaaatcaaatggacaacaaatggcctttctaacagtcactgataccaagaaaaagtgc
gatgtcaccgtttttccagagcagttcagtaaagtgcactccttgcttgttgaggggcaa
atggtctttatacaaggacgcgttaaagaacgagatggtcgtttgcaagttgttctagaa
aacattgaaatggctagcagtaagaatttttggttgttagttgaatctcatgaaaatgat
aagatgattgcaagcattttaagacgccaccccggtgattttccggtcattattcattat
aaagagagcaaagaaacccttaaaatacctggtattttagttcgagttagtgaagattta
gagtctgaactaaaagattttgtactgaaaacggtttatcgataa
DBGET
integrated database retrieval system
