KEGG   Streptococcus uberis: SUB1392
Entry
SUB1392           CDS       T00849                                 
Name
(GenBank) putative phosphohydrolase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sub  Streptococcus uberis
Pathway
sub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SUB1392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sub03019]
    SUB1392
Messenger RNA biogenesis [BR:sub03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SUB1392
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_2 ATP-synt_B KH_KhpA-B dUTPase KH-I_KHDC4-BBP KH_PNO1_2nd DUF7623 EpuA
Other DBs
NCBI-ProteinID: CAR43012
UniProt: B9DV49
LinkDB
Position
complement(1389009..1390616)
AA seq 535 aa
MINIILLIVCALIGLIIGYAMISLKLKKAKESADLTLLNAEQDAVNIRGKAVAEADHIRE
SAERESKANRKELLLEAKEEARKYREEIEQEFKSERQELKQLETRLNERAFSLDRKDENL
TSKEKVLDSKEQSLTDKSKHIDERQTEVERLEEVKKEELQRVAAMTIAEAREVILMETET
KLTQEIASRIRDAEREIKDRANKTAKDLLSQAMQRVAGEYVTEQTITSVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLISDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGILAGELGENVALARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPVVINTIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSFALQ
AGREIRIMVQPEKVSDDEVVILSHKVREKIENNLDYPGNIKVTVIREMRAIDYAK
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgattaatattattttattaattgtttgtgccctcattggtttgatcataggttatgca
atgatttcgcttaaattaaaaaaagcgaaagaaagtgctgacttgactcttttaaatgct
gagcaggatgcggtaaatattcgtggtaaagctgttgctgaagctgatcatattagagaa
tcagcagagcgtgaaagcaaagcgaatcgtaaagaactgctgttagaagcaaaagaagag
gcaagaaaatatcgtgaagaaattgagcaagaatttaaatctgaaagacaagagctaaaa
caattagaaacacgacttaatgagcgtgccttttctcttgaccgaaaagatgagaattta
acaagtaaagaaaaagttctagatagtaaagaacaaagtctgaccgataaatctaaacat
attgatgagcgtcaaacagaagtcgaacgactcgaagaagtaaaaaaagaagaattacaa
cgtgttgcggcaatgaccattgcagaagcaagagaagtgattctgatggaaactgagact
aaactcactcaggaaattgctagcagaattcgtgatgccgaaagagaaatcaaagatcga
gctaataaaacagctaaagatttgctatctcaagccatgcaaagggtggcaggcgagtat
gtcacagagcaaaccattaccagtgtccatttaccagatgacaatatgaaaggtcgtatt
attggccgagaaggtcgtaatattcgtactttagaaagcttaactggtattgatgttatc
attgatgatacaccagaagtcgttgttttatcaggatttgatccaattcgacgtgaaatt
gcccgaatgaccctcgagtctctcatttcagatggaaggattcatcctgctcgaattgaa
gaattagtcgaaaagaatcgtctggaaatggataaccgcattcgtgagtatggcgaagct
gctgcttatgaaatcggagctcctaatctacatcccgatttaattaagattatgggtaga
ttgcaattcagaacatcgtatggtcaaaatgttcttcgacactcagtcgaagttggtaaa
cttgctggtattcttgcaggtgagctaggtgaaaatgttgccttggcaagacgagctggg
ttcttacatgatatgggtaaagccattgaccgtgaagttgaaggtagccatgtcgaaatt
ggtatggaatttgcacgcaagtacaaggaacatccagttgttatcaacacgattgccagt
caccacggagatgtagaaccggaatctgtcattgcagttattgttgcagcagcagatgct
ttgagttcagctagacctggtgcgcgtaatgaatccatggagaattacattaaacgtctc
cgtgatttagaagagattgctacaagctttgacggcgttcaaaatagctttgctttacaa
gctggtagagaaattcgcattatggtgcaaccggaaaaagtttcagatgatgaagtcgtt
atcctgtctcataaagtacgtgaaaaaattgaaaacaatttagattaccctggtaatatt
aaagtgaccgtaatacgtgagatgagagcaatcgattatgccaaataa

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