Streptococcus uberis: SUB1392
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Entry
SUB1392 CDS
T00849
Name
(GenBank) putative phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sub
Streptococcus uberis
Pathway
sub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUB1392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sub03019
]
SUB1392
Messenger RNA biogenesis [BR:
sub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SUB1392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
ATP-synt_B
KH_KhpA-B
dUTPase
KH-I_KHDC4-BBP
KH_PNO1_2nd
DUF7623
EpuA
Motif
Other DBs
NCBI-ProteinID:
CAR43012
UniProt:
B9DV49
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Position
complement(1389009..1390616)
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AA seq
535 aa
AA seq
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MINIILLIVCALIGLIIGYAMISLKLKKAKESADLTLLNAEQDAVNIRGKAVAEADHIRE
SAERESKANRKELLLEAKEEARKYREEIEQEFKSERQELKQLETRLNERAFSLDRKDENL
TSKEKVLDSKEQSLTDKSKHIDERQTEVERLEEVKKEELQRVAAMTIAEAREVILMETET
KLTQEIASRIRDAEREIKDRANKTAKDLLSQAMQRVAGEYVTEQTITSVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLISDGRIHPARIE
ELVEKNRLEMDNRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGILAGELGENVALARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPVVINTIAS
HHGDVEPESVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIATSFDGVQNSFALQ
AGREIRIMVQPEKVSDDEVVILSHKVREKIENNLDYPGNIKVTVIREMRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgattaatattattttattaattgtttgtgccctcattggtttgatcataggttatgca
atgatttcgcttaaattaaaaaaagcgaaagaaagtgctgacttgactcttttaaatgct
gagcaggatgcggtaaatattcgtggtaaagctgttgctgaagctgatcatattagagaa
tcagcagagcgtgaaagcaaagcgaatcgtaaagaactgctgttagaagcaaaagaagag
gcaagaaaatatcgtgaagaaattgagcaagaatttaaatctgaaagacaagagctaaaa
caattagaaacacgacttaatgagcgtgccttttctcttgaccgaaaagatgagaattta
acaagtaaagaaaaagttctagatagtaaagaacaaagtctgaccgataaatctaaacat
attgatgagcgtcaaacagaagtcgaacgactcgaagaagtaaaaaaagaagaattacaa
cgtgttgcggcaatgaccattgcagaagcaagagaagtgattctgatggaaactgagact
aaactcactcaggaaattgctagcagaattcgtgatgccgaaagagaaatcaaagatcga
gctaataaaacagctaaagatttgctatctcaagccatgcaaagggtggcaggcgagtat
gtcacagagcaaaccattaccagtgtccatttaccagatgacaatatgaaaggtcgtatt
attggccgagaaggtcgtaatattcgtactttagaaagcttaactggtattgatgttatc
attgatgatacaccagaagtcgttgttttatcaggatttgatccaattcgacgtgaaatt
gcccgaatgaccctcgagtctctcatttcagatggaaggattcatcctgctcgaattgaa
gaattagtcgaaaagaatcgtctggaaatggataaccgcattcgtgagtatggcgaagct
gctgcttatgaaatcggagctcctaatctacatcccgatttaattaagattatgggtaga
ttgcaattcagaacatcgtatggtcaaaatgttcttcgacactcagtcgaagttggtaaa
cttgctggtattcttgcaggtgagctaggtgaaaatgttgccttggcaagacgagctggg
ttcttacatgatatgggtaaagccattgaccgtgaagttgaaggtagccatgtcgaaatt
ggtatggaatttgcacgcaagtacaaggaacatccagttgttatcaacacgattgccagt
caccacggagatgtagaaccggaatctgtcattgcagttattgttgcagcagcagatgct
ttgagttcagctagacctggtgcgcgtaatgaatccatggagaattacattaaacgtctc
cgtgatttagaagagattgctacaagctttgacggcgttcaaaatagctttgctttacaa
gctggtagagaaattcgcattatggtgcaaccggaaaaagtttcagatgatgaagtcgtt
atcctgtctcataaagtacgtgaaaaaattgaaaacaatttagattaccctggtaatatt
aaagtgaccgtaatacgtgagatgagagcaatcgattatgccaaataa
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