Streptococcus uberis: SUB1612
Help
Entry
SUB1612 CDS
T00849
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sub
Streptococcus uberis
Pathway
sub03030
DNA replication
sub03430
Mismatch repair
sub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SUB1612
03430 Mismatch repair
SUB1612
03440 Homologous recombination
SUB1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sub03032
]
SUB1612
03400 DNA repair and recombination proteins [BR:
sub03400
]
SUB1612
Enzymes [BR:
sub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SUB1612
DNA replication proteins [BR:
sub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SUB1612
DNA repair and recombination proteins [BR:
sub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SUB1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAR43445
UniProt:
B9DVQ3
LinkDB
All DBs
Position
complement(1593668..1594258)
Genome browser
AA seq
196 aa
AA seq
DB search
METLSHFIAFDLEFNTVNDKSHLIQLSAVKIDADTEIDHFNSYVYTDVPLQSFINGLTGI
TADKIAQAPKIEAVLSAFKAFVSDYPLIGYNAHKSDLPILAENGLDLSNHYRVDVYDEAF
ERRSTDLNGIANLKLTSVADFLGIKGRGHNSLEDARMTAHVYQHFMELDANKALLDQQET
ISGDNPFADLSGWFDQ
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccttaagtcattttatagcttttgatttagaattcaatacggtcaatgataag
agtcacttgattcagttatcagccgttaaaattgatgctgatacagaaatagaccatttt
aatagttatgtctacactgatgttccattgcaaagttttatcaatggtttaacaggaatt
actgcagataaaatcgcacaggctcccaaaatagaagcagtattaagtgcttttaaggca
tttgtgtctgattatcccctcatcggctataatgctcacaaatcggatttacccatttta
gccgaaaatggcttggatttaagtaatcactaccgcgtggatgtatatgatgaagctttt
gagcgtcgtagtaccgatttaaatggcattgccaatttgaaattaacaagtgttgctgat
tttttagggatcaaaggacgtggccataatagtttagaagatgcccgcatgacagcacac
gtctaccaacattttatggagcttgatgctaataaggccctgcttgatcaacaagaaacc
atctcaggagataacccgtttgctgatttaagtggttggtttgaccaataa
DBGET
integrated database retrieval system
