Subtercola endophyticus: LQ955_00460
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Entry
LQ955_00460 CDS
T08409
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
suba
Subtercola endophyticus
Pathway
suba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LQ955_00460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
suba02022
]
LQ955_00460
Two-component system [BR:
suba02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
LQ955_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
HTH_23
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_29
HTH_IclR
HTH_Tnp_ISL3
HTH_40
HTH_24
Motif
Other DBs
NCBI-ProteinID:
UFS59310
LinkDB
All DBs
Position
101143..101754
Genome browser
AA seq
203 aa
AA seq
DB search
MIRLLLADDQALVRGALAALLGLEPDLEIVAEAERGDVVVELARETDPDVALLDVEMPGL
DGIAVTARLREALPSCRVLVVTTFGRPGYLKRAMAAGASGFVVKDTPARQLADAVRRVHA
GQRVVDPALAAESLASGDNPLSARESDILRAAQRGGSVADIAAALFLSEGTVRNYLSSAI
GKTAARSRAEAVRIAEDNGWLLS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgatccggctgctgctcgccgacgaccaggcgctcgtgcgcggcgctttggccgccctg
ctcggcctcgaacccgacctcgagatcgtcgcagaggctgagcgcggcgatgtcgtggtc
gaactcgcccgcgaaaccgatcccgatgtcgccctgctcgacgtcgagatgccgggcctc
gacggaatcgccgtcactgcccgacttcgcgaagcgctgccctcgtgccgtgtgctcgtg
gtgaccacgttcggccgcccgggctacctcaagcgcgccatggccgccggcgccagcgga
ttcgtcgtcaaagacactcccgcacgccagctcgccgatgccgtacgccgcgtgcacgcc
ggccagcgcgtcgtcgaccccgcactcgccgcggaatcgctcgcctcgggcgacaacccg
ctctccgcgcgcgaatccgacattctgcgcgccgcccagcgcggcggcagcgtggccgac
atcgccgcggccctctttctctctgagggtacggtgcgcaactacctctcgagcgccatc
ggcaagaccgccgcccgcagtcgtgccgaggccgtgcgcatcgctgaagacaacggctgg
ctgctcagctga
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