Subtercola endophyticus: LQ955_00800
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Entry
LQ955_00800 CDS
T08409
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
suba
Subtercola endophyticus
Pathway
suba02010
ABC transporters
suba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LQ955_00800
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ955_00800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
suba02000
]
LQ955_00800
Transporters [BR:
suba02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LQ955_00800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
UFS59374
LinkDB
All DBs
Position
157176..158504
Genome browser
AA seq
442 aa
AA seq
DB search
MIKSKYALRTSILAGAGIIAIMLSGCASGGSSTPSSSASSSASATETDCASDATTANNLV
VGTILPITGSLAYLNPPEQAGVGLAVSDINAAGGVDGKQACILPTDSGDSTDLSVSTASA
QKLITAKPSVAIGAASSSVSLNVVDAFASAKITQISPANTSAKLSGYGPFYYRTAPPDSV
QGSALGSLITGDGNSKVAFLVFNDSYGTGLRDFTQKSIESAGGTVVYGATGAGQEFPPGQ
TTFSAEVTAALASKPDAIVILAFDETKSIIPELVAQGWNMSKTYLSDGNTADYSKDFQAG
TLTGAQGTIPGAQPNDTFKAQLVSWYKGAENADLKDFSYAPEAYDATTLTALAALKAKSN
VSADLNKELAAVSGANGGTKCASYAECAPLVSAGTEIQYTGQSGIGPFNSHNEPSSAFIG
IYKYNADNTYTFQSAIEGETSY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccaagtatgccctccggacatcgattctggccggagcaggcatcattgcc
atcatgctttccggctgtgcctccgggggcagctcaactccatcttcttcggcgtcttcg
tcggcgtcggccactgagaccgactgcgcgagcgatgccacaacggccaacaacctggtc
gtcggtaccatcctccccatcaccggtagcctcgcttacctgaacccgccggagcaggcc
ggtgtcggcctcgcggtctcagacatcaacgctgcgggcggcgtcgatggcaagcaggct
tgtatcctccccaccgactcgggtgactcgaccgacctcagcgtctcgaccgcttcggct
cagaagctcatcacggccaagccgtcggtggccatcggtgccgcgtcgtcgagcgtttcg
ctgaacgtcgtcgacgcgttcgcttcggccaagatcacgcagatctcgccggcgaacacc
tcggccaagctcagcggttacggtccgttctactaccgcaccgctccgccggactcggtt
cagggttcagccctcggctcgctcatcacgggtgacggcaactcgaaggtcgccttcctg
gtcttcaacgactcgtacggcaccggtcttcgtgacttcacgcagaagagcatcgagtct
gcaggcggcaccgtcgtctacggcgctaccggcgccggccaggagttccctcccggccag
accacgttctcggctgaagtgaccgcggcgcttgccagcaagcccgacgcgatcgtcatc
ctggcgttcgacgagaccaagtcgatcatccctgagctcgtcgctcagggctggaacatg
tccaagacctacctgtcagacggcaacaccgccgactacagcaaggacttccaggcgggc
accctcaccggcgcccagggcaccatccccggtgctcagccgaacgacacgttcaaggct
cagctcgtctcctggtacaagggtgcagagaacgcagacctcaaggacttctcctacgct
cctgaggcctacgacgcgaccaccctcaccgccctcgcggcgctgaaggccaagtcgaac
gtctcggcagacctgaacaaggaactcgcggctgtctccggtgcgaacggcggcaccaag
tgtgcctcgtacgccgagtgtgctccgctggtttcggccggtaccgagatccagtacacg
ggtcagtcgggcatcggtccgttcaactcgcacaacgagccgtcgagcgcgttcatcggc
atctacaagtacaacgccgacaacacctacacgttccagtcggccatcgaaggcgagacc
tcctactaa
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