Subtercola endophyticus: LQ955_00995
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Entry
LQ955_00995 CDS
T08409
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r4_2
Sigma70_r2
Big_13
Sigma70_r4
MlaC
Motif
Other DBs
NCBI-ProteinID:
UFS59407
LinkDB
All DBs
Position
complement(202811..205444)
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AA seq
877 aa
AA seq
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MTNEGPVGAHAVLGDENGPSDLELVQRTREGDSRAFGELWNRHSRAGRTVARSYALDPDD
VVAESFAKVLQAIKGGGGPTAAFRPYLFSTIRNVAMQWRKASIVDASDELDALADPSSED
SETLLALDKSLTAQAFRSLPTRWQEALWYSEVEQLSSQEISPLLGMTSNAVSALTFRARE
GLRQAWIQAHLVRSADTECAAVIEKLGSYTRGSLGPRESKRVEAHLAGCPSCTIVEEEAK
DIGSRLALVMLPLAAGIAGALAYTVWLQGGSSASAATLGALASGVGPGGAGSGSVVAGGA
GSASVGTGGAGSGAAGSASVGTGGAGSGAAGSGAAGSGAAGSASVVSGGSAPVGADAAAK
MQQAFNTHSNTSHSLGSSGPEPIHDANAVGGDTASRAAGHSASHAAGHSASHAAGRAASR
AGSHAATAAPVDRAVGRMPTPANVPSIMPSPGVLAGIGLAVAAAIGAAFVLGPLASHTAT
TPISEVAAAQSSGGERQFDANALYGAPKPGAAARTAAAQAAAEATAQAAAATAAQAAAAA
AQAAANTTADGAGSGAGGQSAHSGAGTSGSGSSESGSSGSGSSGSGSSGSGSSGSGTGTA
GGDPTQSSPTNGGASTQPGGGSTPTSPPTSPPPASPPPASPPASPPPTSPPPSVPPTVPP
TAPPTSPPPTSPPPTAPPTAPPTTPPPTDEAPQPPQAQFTLDENNQLYPILAGTANPGAT
VEVVDQTAVGAEVVAQTVADGSGSFGLRDFPGLGFGTHRLAVRQVSDAGVASAATSSTAV
VLDDIRILSPTAGATLDDVDYVLAASGDAQSFFDVIVDGVSAATGLPLNSDGNASVQLRL
PDTTSAGPVTISVRYSDSSAGRFGPEKSVSVTFAPAT
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacgaagggccggtcggcgcgcacgcggtgctcggcgacgagaacggcccgagc
gatctcgagctggtgcaacgcacccgcgaaggcgactcgcgcgccttcggcgagctgtgg
aaccggcactctcgagccggccgcacggtcgcccgcagctacgccctcgaccccgacgac
gtcgtcgccgagagcttcgcaaaagttctgcaggccatcaagggcggcggcgggcccacg
gcggcgttccggccgtacctgttcagcaccatccgcaacgtggccatgcagtggcgcaag
gccagcatcgtcgacgcgagcgacgaactggatgccctggccgacccctcgtcagaagac
tccgagactctgctggccctcgacaagagcctcaccgcacaggcttttcgctcgctgccg
acccgctggcaagaggcactctggtacagcgaggtcgagcagctctcgtcgcaagagatc
tcaccgctgctcggcatgacgtcgaacgcggtgtcggcgctgaccttccgcgctcgagag
ggcctgcgccaggcatggattcaggctcatctggttcgctcggccgataccgagtgcgcg
gcggtcatcgaaaagctcggttcgtacacccgcggcagtctcggcccgcgcgagtcgaaa
cgtgtcgaggcgcacctggccgggtgcccgtcgtgcaccattgtcgaagaagaggccaaa
gacatcgggtcgcggctcgctctggtgatgctgccgctcgcggccggtatcgccggtgcg
ctcgcctacacggtgtggctgcagggcggcagcagcgcttcggccgcgacgctgggcgcg
ttggcgagtggagtgggccccggtggggccgggtcgggctctgtcgtcgcgggtggggcg
gggtcggcctcggtcggcaccggcggggcgggatcgggtgcggcggggtcggcctcggtc
ggcaccggcggggcgggatcgggtgcggcggggtcgggtgcggcggggtcgggtgcggcg
gggtccgcttcggtcgtcagcggcggctccgctccggttggcgccgacgccgccgccaag
atgcagcaggcgttcaacacccactcgaacacctcgcactccctcggcagcagcggccct
gaacccatccacgatgcgaatgctgtcggtggagacactgcgagtcgcgccgcgggccac
tccgcgagtcacgccgcaggccactccgcgagccacgctgccggccgagcggctagccgc
gctgggagccacgccgccaccgcagcgcccgtcgaccgcgcggttggccgcatgcccacc
ccggcgaacgttccctcgatcatgccgtcgccgggtgtgctggcgggcatcgggctcgcc
gtagcggcagccatcggtgccgcgtttgtgctcggtccgctggcgagtcacaccgcgacg
accccgatctccgaggtggcggccgcgcaatcctcgggtggtgaacgacagttcgacgcg
aatgcgctgtacggtgcgcctaagcccggtgccgcggctcgcacggctgccgcacaggcc
gccgccgaggcaactgcgcaagcggcggccgcgacagccgcgcaggccgcagccgccgcc
gcacaggccgccgcgaacaccacagccgacggcgccgggtcgggcgcgggtggccagtct
gcgcactcgggcgcgggcacgtccgggtcagggtcgtccgagtcggggtcgtccgggtca
gggtcgtccgggtcagggtcgtccggatcagggtcatcgggctccggcacaggcactgcg
ggaggcgatccgacgcagtcgtcaccgacgaacggaggcgcgagcactcaaccgggcggt
ggctctacgccgacctcgccgccgacgtctcccccgcctgcatcaccgccgcccgcgtca
cccccagcgtccccaccgccgacgtctccaccgccgtcagtgccgccgactgtgccgcca
acggcaccgccgacatctccaccacccacttcaccaccgccgaccgcgccgccgactgcg
ccacccacgacccctccgccgacagacgaggcgccgcaacctccgcaggcgcaattcacg
ctcgatgagaacaatcagctgtacccgatcctcgcgggcacagcgaatcctggcgcgact
gtcgaggtcgtcgatcagacggcggtcggcgccgaggtggtagctcagaccgtggcagac
ggttcggggtctttcggcctgcgcgattttcccggactcgggttcggaacccatcggctc
gcggtacgccaggtctccgacgcgggcgtggcttcagccgcgacgtcgagcacggccgtc
gtgctcgacgacatcagaatcctgtcgccgacggcaggcgcgacactcgacgacgtggat
tacgtcttggccgcgtctggcgacgctcaatcgttcttcgacgtgatcgtcgatggtgtc
agcgcagccaccgggctgccgctgaattccgacggcaacgcgtcggttcagctcaggctg
cccgatacgacctcggccggcccggtgaccatctcggttcgttacagcgattcgtctgcg
ggccgcttcgggccagagaaatcggtcagcgtgaccttcgcccctgccacgtga
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