Subtercola endophyticus: LQ955_02680
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Entry
LQ955_02680 CDS
T08409
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
suba
Subtercola endophyticus
Pathway
suba00523
Polyketide sugar unit biosynthesis
suba01110
Biosynthesis of secondary metabolites
suba01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LQ955_02680
Enzymes [BR:
suba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
LQ955_02680
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
NAD_binding_10
Polysacc_synt_2
RmlD_sub_bind
NmrA
adh_short
KR
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UFS59723
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All DBs
Position
complement(513779..515083)
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AA seq
434 aa
AA seq
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MVSTPADATTITSDRGLLLVTGGAGFIGGAIVNQALEAGWRVRVLDNLRADVHAAQPATG
TEFVSPFVSPFADPRVDFRLGDVTDPAAVADALQGVTVVSHQAAKVGLGVDFSDAPDYVA
SNDLGTAVLLAAMARAGLKRLVLASSMVVYGEGKYRRASTVDDASGAGAAAVGTPASSAV
RPAPRRIADLEAGRFDPVDPVTGEALAPDFINEDDPLDPRNVYASSKLAQEHLASAWARS
TGGRVIALRYHNVYGPGMPQNTPYAGVASLFRSALERGEAPRVFEDGNQRRDFVHVRDIA
GANLAAIDATGGGAGVMGAEVMGTDAMGTDAGAANGGAADGGAANGAMADAPGFRAYNVG
SGDVHTIGDLATALSRFAGGPEPVFTGEFRLGDVRHITASSERLRSELGWHPTMSFDDGM
REFATAPLRAAVSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctacccccgccgacgcgaccacgatcacgagtgatcgcggcctcctgctcgtc
accggcggagcggggttcatcggcggagccatcgtgaaccaggcgctcgaggccggctgg
cgcgttcgcgttctcgacaacctgcgcgccgacgtgcacgcagcgcagcccgcgaccggc
accgagttcgtgagcccgttcgtgagcccgttcgccgacccgcgggtcgacttccggctc
ggtgacgtcaccgaccctgcggccgtggcggatgccctgcagggcgtcaccgtcgtcagc
catcaggcggcgaaagtgggcctcggtgtcgacttctccgacgcaccggactacgtcgcg
agcaacgacctcggcaccgcggtgctgctggcggcgatggcgcgcgccggcctcaagcgg
ctggtgctggcctcgtcgatggtggtctacggcgagggaaagtaccgccgggcatccacc
gtcgacgacgcttctggcgcaggcgccgctgccgtgggcacacccgcgtcgagtgccgtg
cgcccggctcctcgacgaatcgcagatcttgaagcgggcaggttcgaccccgtcgatccc
gtcaccggagaagcgctcgcccccgacttcatcaacgaagacgacccgctcgacccccgt
aacgtctacgcttcgagcaaactggcacaggagcacctcgcctcggcatgggcgcgctcg
acgggcggacgcgtgatcgccctgcgctaccacaacgtctacgggccgggaatgccgcag
aacacgccctacgcaggagtcgcgtcgctgttccgttccgcactcgagcggggcgaagcg
cctcgggtcttcgaagacggcaaccagcgccgtgacttcgtgcacgtgcgagacatcgcg
ggcgcaaacctcgccgcgatcgacgcgaccggcggtggcgcgggcgtgatgggcgcagaa
gtgatgggcacagacgcgatgggcaccgacgcgggcgccgcgaatggcggcgcggcagat
ggcggcgcggcgaatggcgctatggcggatgcgcccggctttcgcgcctacaacgtgggc
agcggcgacgtgcacaccatcggcgacctggccaccgcgctcagccgcttcgcgggcggc
cccgaacccgtgttcaccggcgaattccggctcggcgacgttcggcacatcaccgcatca
tctgaacggctgcggagcgagctcggctggcaccccaccatgtcgttcgacgacggcatg
cgcgagttcgcgacggctcccctgcgcgccgcggtcagctcgtga
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