Subtercola endophyticus: LQ955_03825
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Entry
LQ955_03825 CDS
T08409
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
suba
Subtercola endophyticus
Pathway
suba03420
Nucleotide excision repair
suba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQ955_03825
03430 Mismatch repair
LQ955_03825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_03825
Enzymes [BR:
suba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQ955_03825
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQ955_03825
MMR (mismatch excision repair)
Other MMR factors
LQ955_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UFS61055
LinkDB
All DBs
Position
772284..773984
Genome browser
AA seq
566 aa
AA seq
DB search
MLAGLDAEQRVVATTLLGPVSVLAGAGTGKTRAITHRIAYGVATGVFPPNKVMALTFTSR
SAAELRARLRPLGAGGVAARTFHSAALSQLNFFWPQVVGGTVPRLIDSKARVLGQVAEQL
KLRIDTATLRDLAAEIEWRKISNLTIEQYERAARTSRAQPGSLTVQQVLELQVGYESIKD
ERRQLDFEDVLLATAGMIESEPSVAMQVREQYRFFVVDEFQDVSPLQYHLLSLWLGDRRD
LCVVGDASQTIYSFAGARADFLLSFASQFPASAVVRLEQNYRSTPAIVDTANRLMRGRPG
ALTLRAASTVTAGLPPTITGYPSDAAEARGIAAAIAALIADGTRPHDIAVLYRMNAQAAA
LEGALAEANVPYQIRGAQRFFDLPEVKQAVMSLRAASVSIMGEPLFKSVSDVLRSLGWSQ
SPPEGRGALRDRWDSLNAIMGLAEQQPPRTTFRAFTDELLERQSAQHEPTLAAVTLATLH
SAKGLEWPVVYVAGLSEGLVPISYATTLDQIDEERRLLYVGITRARQRLALSYSQTGAGR
SQSRAPSRFLQELGTRTPDARSAVSR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
ctgctcgccggcctcgacgccgagcagcgggtcgtcgcgacgaccctgctcgggccggtc
tctgtgctcgcgggagccggcacgggcaagacccgagccattacgcatcgcatcgcctac
ggcgtcgcgaccggggtgtttccgccgaacaaggtcatggcactgaccttcacctcgcgt
tcggctgcagaactcagagctcggcttcgccctctcggcgccgggggagtcgccgcacga
acttttcactcggcggccctctcccaactcaatttcttctggccgcaggtcgtcggtgga
acggttccgcgtctcatcgacagcaaagcccgggtgctcgggcaggtcgccgagcagctc
aagctgcgcatcgacactgcgacgctgcgtgacctggccgcagagatcgagtggcgcaag
atctccaatctcaccatcgagcaatacgaacgagccgcgcgaacgtcgagggctcagccc
ggctcgctgacggtgcagcaggtgctcgaactgcaggtggggtacgagagcatcaaagac
gagcgccggcaactcgacttcgaagacgtgctgctcgcgacagccggcatgatcgagagt
gaaccctcggtagccatgcaggtgcgggagcagtaccgcttcttcgtggtcgacgagttt
caagacgtttcgcccttgcaataccacttgctgtcgctgtggctgggcgaccgtcgagac
ctgtgtgtcgtcggcgacgccagccagaccatctactcgttcgccggcgcacgcgcggac
ttcttgctctcgttcgcctcgcagtttccggcgtcggccgtcgttcgactcgaacagaat
tatcgctccaccccggcgatcgtcgacaccgctaaccggctcatgcgtggccggcccggt
gccctcactctgcgtgccgcgagcacggtgaccgccggcctgccgccgacgatcacgggc
tacccctccgacgcggcggaggcgcgcggtatcgcggctgcgatcgcggccctcatcgcc
gacggcactcggccgcacgacatcgccgtgctctaccgcatgaacgcccaggccgcggcg
ctcgaaggcgctctcgccgaggcgaatgttccctaccagattcggggcgcacagcgcttc
ttcgacctgccagaggtgaagcaggcggtcatgtcgcttcgcgccgcgtcggtgtcgatc
atgggtgagccgctcttcaagtcggtgagcgacgttcttcgctcgctgggctggtcgcag
agcccgccagagggccgcggcgcgctgcgcgaccgctgggattcgctgaatgcgatcatg
ggcctcgccgaacagcagccaccgcgaacgacgtttcgcgctttcaccgacgaacttctc
gagcggcagtcggcacaacacgaaccgacccttgcggcggtgacgctggcgaccctgcac
tctgcgaaagggctcgaatggccggtggtgtacgtcgccggcctctcggaggggctggtt
ccgatctcgtacgccaccacgctcgaccagatcgacgaagaacgccgcctgctctacgtg
ggcatcacacgggcacggcaacggcttgccctgtcatactcccaaacgggcgctggccgg
tcgcagtcccgggccccgtcacgctttctgcaagaactcggcacccgcactccggatgca
cgctccgccgtgtctcggtga
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