Subtercola endophyticus: LQ955_03955
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Entry
LQ955_03955 CDS
T08409
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
suba
Subtercola endophyticus
Pathway
suba03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LQ955_03955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_03955
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LQ955_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5321
MEDS
Motif
Other DBs
NCBI-ProteinID:
UFS59948
LinkDB
All DBs
Position
complement(805005..805862)
Genome browser
AA seq
285 aa
AA seq
DB search
MRSIWKGAITFGLVNVPVKVYSATEDHDISLHQVHDADGGRIRYQRVCEIDGKVVEYAHI
DKAYDDGERTVIITADDLASLPAEKSREIDVVEFVPSDQIDPIRFDRSYYLEPDSKSSKA
YVLLRRTLEETDRTAIVQFALRQKSRLAALRVQGEVLLLQTLLWDDEVRDAKFTSLNDRP
TVSAKELEMSARLVDSYSADFEPSKFTDEYQVQLRQLIDAKLEAGDAVDTEETFGESAKN
DEDSGGEVLDLMEALRQSVEKSRAKGGEKSSTTRAPRKTAAKKPA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagatcaatttggaagggcgcgatcaccttcgggctggtgaatgtgccggtcaaggtc
tacagcgccaccgaagaccacgacatttcgctgcaccaggtgcacgatgccgatggcggg
cgcatccgctaccagcgggtctgcgagatcgacggcaaggtcgtggagtacgcccacatc
gacaaggcgtacgacgacggcgagcgcaccgtcatcatcaccgccgacgatctcgcctcg
ctgccggccgagaagagccgcgagatcgatgtggtcgagttcgtgccgagcgaccagatc
gaccctattcgctttgaccgcagctactacctcgagcccgactcgaaatcgtcgaaggcg
tacgtgctgctgcggcgcacgctcgaagagaccgaccgcaccgccatcgtgcagttcgcc
ctgcggcagaagtcgcggctggcggcgttgcgcgttcagggcgaggtgctgctgctgcag
acactgctctgggacgatgaagtgcgcgacgcgaagttcacctcgctgaacgaccgcccc
acggtctcagcgaaagaactcgagatgtcggcgcgcctggtcgactcctattctgccgat
tttgagccttcgaaattcaccgacgagtatcaggtacagctgcgtcagctcatcgacgcc
aagctcgaggccggcgacgctgtcgacacggaggagaccttcggcgaatcggccaagaac
gacgaggattccggcggcgaggtgctcgacctcatggaggcccttcggcagagtgtggag
aagagccgggcgaagggtggggagaagtcctccaccactcgtgcaccgcgtaagacggct
gccaagaagccggcctga
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