Subtercola endophyticus: LQ955_04370
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Entry
LQ955_04370 CDS
T08409
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
suba
Subtercola endophyticus
Pathway
suba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ955_04370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_04370
Enzymes [BR:
suba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LQ955_04370
DNA repair and recombination proteins [BR:
suba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LQ955_04370
Prokaryotic type
LQ955_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFS61066
LinkDB
All DBs
Position
893741..894391
Genome browser
AA seq
216 aa
AA seq
DB search
MDAGWAEALTPVAGDIARMGDFLRAEVAAGRGYLPAGANVLRAFRYPLDGVRVLIVGQDP
YPTPGHPIGLSFAVERHVRPVPRSLANIYKELNADLGVTPPAHGDLTAWSANGVMLLNRV
LTVQPGVAGSHRGKGWEAVTELAIKTLVARGTPLVAILWGRDAANLKPWLGGVPVIESAH
PSPLSASRGFFGSKPFSRANAALEAQGAAAVDWSLE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggctgggccgaggcgctcacgccggtggccggcgacatcgcccgcatgggc
gacttcttacgagccgaagtcgcggccgggcgcggctacctgcccgcgggcgcgaacgtg
ttgcgcgcttttcggtacccgctcgacggcgttcgggtgctcattgtggggcaagacccg
taccccacccccgggcatccgatcggcctctcgttcgcggtggagcggcacgtgcgcccg
gttccgcgcagcctcgccaacatctacaaggaactgaatgccgatctcggcgtgacacct
ccggcacacggcgacctgacggcgtggtcggctaacggcgtcatgctgctcaaccgagtg
ctcacggtgcagccgggggtcgccgggtcgcatcggggcaagggctgggaggccgtgacc
gagctcgccatcaagaccctggttgcgcgcggaactccgctcgtcgccattctgtggggt
cgggatgccgccaacctcaaaccgtggctcggcggcgtgccggtcatcgagtctgcacac
cccagcccgctttcggcgagtcgggggttcttcggttcgaagccgttcagccgcgccaac
gccgccctcgaggcgcagggcgctgccgccgtcgactggtcgctcgaatag
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