Subtercola endophyticus: LQ955_04655
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Entry
LQ955_04655 CDS
T08409
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
suba
Subtercola endophyticus
Pathway
suba00250
Alanine, aspartate and glutamate metabolism
suba00280
Valine, leucine and isoleucine degradation
suba00310
Lysine degradation
suba00410
beta-Alanine metabolism
suba00640
Propanoate metabolism
suba00650
Butanoate metabolism
suba01100
Metabolic pathways
suba01120
Microbial metabolism in diverse environments
Module
suba_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LQ955_04655 (gabT)
00650 Butanoate metabolism
LQ955_04655 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LQ955_04655 (gabT)
00280 Valine, leucine and isoleucine degradation
LQ955_04655 (gabT)
00310 Lysine degradation
LQ955_04655 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LQ955_04655 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
suba01007
]
LQ955_04655 (gabT)
Enzymes [BR:
suba01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
LQ955_04655 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
LQ955_04655 (gabT)
2.6.1.48 5-aminovalerate transaminase
LQ955_04655 (gabT)
Amino acid related enzymes [BR:
suba01007
]
Aminotransferase (transaminase)
Class III
LQ955_04655 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Motif
Other DBs
NCBI-ProteinID:
UFS60067
LinkDB
All DBs
Position
complement(950394..951782)
Genome browser
AA seq
462 aa
AA seq
DB search
MTDTVPTDVYTVPQERKIITAIPGPQSDALHARRLAVVPVGVSSVLPVYIARANGAILVD
VDGNQFIDMGAGIGVTTVGHTEFGVVEAATEQLQNVTHTLFTVTPYEEYVRVAELLAEHT
PGDFAKKTMLANSGAEAVENAVKIARKYTRRVGVAVLEHAYHGRTNLTMAMNFKAAPYST
GFGPFAGDVYRAPNSYPYHDGLSGSEAAARTIGYLEKTVGAYDLACLVVEPIQGEGGFVV
PADGYLPALQAWCTENGIVFVADEIQSGMARTGAYFASEHFGLEPDLVLSAKGIAGGLPL
AAVTGRAEIMDSALPGGLGGTFGGNPVAAAAAVAVFGEIERRGLLAEATRVEQTLSTGLL
ELQKKYDIIGDVRGIGAMIAIELVQPGTGQTTKEPNAAAVTALAAYAAQNGVLILTAGTY
GNVLRFLPSVTITDALLEDALSVLDAGFASLTAAASASTPTA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccgtgccgaccgacgtttacaccgtgccgcaggagcgcaagatcatcacc
gcgattccgggccctcagtctgatgccctgcatgcgcgtcgcctggccgtcgtgccggtc
ggcgtctcatcggtgctgccggtctacatcgcccgcgccaacggcgcgattctcgtcgac
gtcgacggcaatcagttcatcgacatgggtgcgggcatcggcgtgacgacggtcgggcac
accgaattcggagtcgtcgaggccgccaccgagcagctgcagaacgtcacccacaccctg
ttcaccgtcacgccctacgaagaatacgtgcgggtcgccgagctgctcgccgagcacacc
cccggcgacttcgccaagaagaccatgctcgccaattcgggcgcagaggccgtcgagaac
gcggtgaagatcgcccgcaagtacacccgccgcgtgggcgtcgccgtgctcgagcacgcc
taccacggccgcaccaacctcaccatggccatgaacttcaaggcggcgccgtactcgacg
gggttcggtcccttcgccggcgacgtgtaccgcgcgccgaactcctacccctaccacgac
ggcctcagcggatccgaagcggccgcacgaaccatcggctacctcgagaagaccgtcggc
gcttatgacctcgcctgcctcgtggtcgagcccatccagggcgagggcggcttcgtcgtg
cccgccgacggatacctgccggcgctgcaggcgtggtgcaccgagaacggcatcgtgttc
gtcgccgacgagatccagagcggaatggcccgcaccggcgcgtacttcgcgagtgagcac
ttcggtctggagcccgacctcgtgctctcggccaagggcatcgcgggcggtctcccgctc
gctgccgtgaccgggcgtgccgagatcatggactccgcccttcccggcgggctcggcggc
actttcggcggcaaccccgtcgccgccgcagccgccgtcgccgtgttcggcgagatcgaa
cgccgcggcctgctcgccgaggcgacgcgcgtggagcagaccctctcgaccggcctgctc
gagctgcagaagaagtacgacatcatcggcgacgtgcgcggcatcggcgccatgatcgcc
atcgaactcgttcagcccggcaccggccagaccaccaaagagccgaacgcggcagcggtc
acggcactcgcggcctacgctgcccagaacggcgtgctcatcctcaccgccggaacctac
ggcaacgtgctgcgcttcctgccgagcgtcaccatcaccgacgccctcctcgaagacgcc
ctcagcgtgctcgacgccggcttcgcgagcctcaccgccgctgcctctgcctccaccccc
accgcgtga
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