Subtercola endophyticus: LQ955_05665
Help
Entry
LQ955_05665 CDS
T08409
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
suba
Subtercola endophyticus
Pathway
suba00061
Fatty acid biosynthesis
suba00071
Fatty acid degradation
suba01100
Metabolic pathways
suba01212
Fatty acid metabolism
suba02024
Quorum sensing
suba04146
Peroxisome
Module
suba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LQ955_05665
00071 Fatty acid degradation
LQ955_05665
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQ955_05665
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ955_05665
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
suba01004
]
LQ955_05665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
suba04147
]
LQ955_05665
Enzymes [BR:
suba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LQ955_05665
Lipid biosynthesis proteins [BR:
suba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LQ955_05665
Exosome [BR:
suba04147
]
Exosomal proteins
Exosomal proteins of breast milk
LQ955_05665
Exosomal proteins of breast cancer cells
LQ955_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UFS60242
LinkDB
All DBs
Position
complement(1190156..1191859)
Genome browser
AA seq
567 aa
AA seq
DB search
MSIDTPVSTPRPWLSSYAEGVPSDIELPTGSLVDLIESSVSKFGPKVALEFFGSETTYRE
LGEQIDRAAEGLRRLGVKHGDRVALVLPNCPQHIAAFYAVLRLGAIVVEHNPLYTPRELR
HQFEDHGATVAIAWDKVCETIQKMPDDLAVTTLISVDLTRAMPLSTRAALRLPIKRARES
RDALHAKARHTIEWESLLQNRRIKKSVPRPDVTDLALLQYTSGTTGTPKGAMLTHLNLHV
NALQGRAWVPDMTEGTEVVYGVLPMFHAYGLTLCLTFAMTLGARLVLLPRFDVDLVLQAA
KKHPPTFLPAVPPIYQRLAQGAKDRKVDLTSIRVSLSGAMNLPVSTVELWESVTGGLLVE
GYGLTETSPVALANPVGPTRRAGSIGLPFPNTEIRVVDPENVEVDRPVGEAGELLIRGPQ
VFAGYWRKPDQTREVLLPDGWFRTGDIVSLSEDGYVSVVDRMKELIITGGFNVSPSEVED
AVRDHPSVKDVAVVGLPGEKGGEDVVAAVVLKPGATLDEKAIRDFCRDHLTAYKVPRRVV
ELDELPTSLIGKVLRRKVRDDLLAAAE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgacacccctgtgagcaccccccgaccgtggctttcgagctacgccgagggc
gtaccgagcgacatcgagctgccgacgggttcactggtcgatctcatcgagtcgtcggta
tcgaagttcggcccgaaggtcgcgctggagttcttcggcagcgagacgacctaccgcgag
ctgggggaacagatcgaccgggccgccgaagggctgcgcaggctcggggtgaagcacggc
gatcgagtcgccctcgttctgcccaactgcccgcagcacatcgccgcgttctacgccgtg
ctgcgcctgggcgcgatcgtggtcgaacacaacccgctgtacaccccgcgcgagctgcgg
caccagttcgaagaccacggcgccaccgtcgcgatcgcctgggacaaggtgtgcgagacg
attcagaagatgcccgacgacctcgccgtcaccacgctcatctcggtcgacctcacccgc
gccatgccgctgtcgacccgggccgctctgcgactgccgatcaagcgcgctcgtgaatcg
cgcgacgccctgcacgcgaaggcgcggcacaccatcgagtgggaatcgctgctgcagaac
cgtcgcatcaagaagtcggtgccgcggcccgacgtgaccgacctcgcgctgctgcagtac
accagtggcacgacgggaacgccgaagggtgcgatgctcacccatctcaacctgcacgtg
aacgcgctgcaagggcgcgcctgggtgcccgacatgaccgagggtaccgaggtcgtctac
ggcgtcttgccgatgttccacgcctacgggctcaccctctgcctcaccttcgccatgacg
ctgggcgcgcggctggtgctgctcccccggttcgatgtcgatctggtgctgcaagcggcg
aagaagcatccgccgaccttcttgccggcggttccgcccatctaccagcgactcgcgcag
ggcgccaaagatcgcaaggtcgatctcacgagcatccgtgtttcgctgtcgggcgcgatg
aacctgcccgtgtcgacggtcgagctgtgggagagcgtgaccggcggtctgctcgtcgag
gggtacggcctcaccgagacctctccggtcgccctggccaatccggtggggcccaccagg
cgcgccggatcgatcggcctgccgtttccgaataccgagatccgcgtcgtcgacccggag
aacgtcgaggtcgaccggccggtcggcgaggccggtgaactgctcatccggggcccgcag
gtgttcgcggggtactggcgcaagcccgaccagacccgcgaggtgttgctgcccgacggc
tggttccgcaccggcgacatcgtctcgctgagcgaagacggctacgtctcggtggtcgac
cgcatgaaggagctcatcatcacgggcggattcaacgtgtcaccttctgaggtcgaagat
gccgtgcgcgatcatccgagtgtcaaagatgtcgctgtggtgggcctgcccggcgagaag
ggcggcgaagacgtggtcgccgcggtcgtgctgaagccgggcgcgacgctcgacgagaag
gccattcgcgacttctgccgcgatcacctcacggcgtacaaggtgccgcggcgtgtggtc
gaactggatgaactgccgacctcgctcatcggcaaggtcttgcgccgcaaggtgcgcgac
gacctgctggccgccgccgaatag
DBGET
integrated database retrieval system
