KEGG   Subtercola endophyticus: LQ955_06350
Entry
LQ955_06350       CDS       T08409                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
suba  Subtercola endophyticus
Pathway
suba03030  DNA replication
suba03430  Mismatch repair
suba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:suba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LQ955_06350
   03430 Mismatch repair
    LQ955_06350
   03440 Homologous recombination
    LQ955_06350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:suba03032]
    LQ955_06350
   03400 DNA repair and recombination proteins [BR:suba03400]
    LQ955_06350
Enzymes [BR:suba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LQ955_06350
DNA replication proteins [BR:suba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LQ955_06350
DNA repair and recombination proteins [BR:suba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LQ955_06350
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: UFS61102
LinkDB
Position
complement(1342165..1342869)
AA seq 234 aa
MLDAPAGPAWAHRLAVFDLETTGIDVETSRIVTANVSIIDHLGVTQSRFDWMADPGIPIP
AQASAVHGVSTERAVAEGRYAPDVIAEIVDALTAALDEGLSIVIYNAPYDLTLLDREARR
HGITPLREPLPVVDPLVIDKALDRYRKGKRTLEAAALHYEVDLFDAHDAGADAIAAGRVA
QALALRFEAELDITSEQLHHSQVAWARDQSASFQDYMRRTKDPTFTARAAWPIG
NT seq 705 nt   +upstreamnt  +downstreamnt
ctgctcgacgcaccggcggggcccgcgtgggcgcaccggctcgccgtgttcgacctcgag
accaccggaatcgacgtcgaaacgagccgcatcgtcaccgcgaacgtgagcatcatcgac
cacctcggtgtcacccagtcgcggttcgactggatggccgacccgggaatcccgattccc
gcgcaggcgtcggccgtgcacggtgtcagcaccgagcgtgcggtcgccgagggtcgttat
gcgcccgacgtcatcgccgagatcgtggatgctctgaccgccgccctcgacgagggtctg
tcgatcgtcatctacaacgccccgtacgacctcaccctgctcgaccgcgaggcccgccgc
cacggcatcactcccctgcgcgagccgctgcccgtggtcgacccgctcgtcatcgacaag
gcgctcgaccgctatcgcaaaggaaagcgcacgctcgaggcagccgctctgcattacgag
gtcgacctcttcgacgcccacgacgccggtgccgacgccatcgccgcgggccgcgtcgcc
caggcccttgccctgcgcttcgaggccgaactcgacatcaccagcgagcagctgcaccac
tcccaggtcgcctgggctcgtgaccagtccgcctcgttccaggactacatgcgccgcacc
aaagaccccaccttcaccgcccgcgccgcgtggcccatcggctaa

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