Subtercola endophyticus: LQ955_06690
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Entry
LQ955_06690 CDS
T08409
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
suba
Subtercola endophyticus
Pathway
suba00260
Glycine, serine and threonine metabolism
suba00630
Glyoxylate and dicarboxylate metabolism
suba00670
One carbon pool by folate
suba00785
Lipoic acid metabolism
suba01100
Metabolic pathways
suba01110
Biosynthesis of secondary metabolites
suba01200
Carbon metabolism
Module
suba_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LQ955_06690 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LQ955_06690 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LQ955_06690 (gcvP)
00670 One carbon pool by folate
LQ955_06690 (gcvP)
Enzymes [BR:
suba01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LQ955_06690 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
UFS60427
LinkDB
All DBs
Position
complement(1406621..1409647)
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AA seq
1008 aa
AA seq
DB search
MHNQRFADRHIGTDEAAQLAMLEVLGHNSLDELVTAAIPASVRGRSVRAGRGLSPSTLAE
TLSEVRVAAELRELASRNVVNRSMIGLGFYDTAMPAVIRRTIFENPHWYTAYTPYQPEIA
QGRLEALLNFQTMVAELTGLDTANASMLDESTAAAEAMLLLRRASSNSSSVFVVDADLFP
QTKSVLAARADALGITLVEIDLASASTAELPPAFGVIVQYPGASGRIWNPAALIATAHLR
GARVAVAADLLAMTLLTPPGELGADVAVGSAQRFGLPLGYGGPHAGFLAVRAGLERQLPG
RLVGVSRDADGAVAYRLALQTREQHIRREKATSNICTSAVLPAVLASMYAVYHGPEGLRR
IATEVNRAARLLAATLNSGGLRVLYDDFFDTIQVSVPKRAVQLANELHGQGYLVRVVDDD
TLGFSVDETTDGEDLAAVMSALASVSTVGERSARPGPSIPSSLERTSAFLEHPVFRRYRS
ETALLRYIRRLGAKDYALDNGMIPLGSCTMKLSSAVSMEAASLPGFAGIHPFAPAEDVQG
YLQLIDQLEVWLAELTGYDSVSLQPNAGSQGELAGLLAIRSYHLQRGEGRRDECLIPSSA
HGTNAASAVLAGMRVVLVDCDELGNVDLADARQKIADHADRMAALMITYPSTHGVFEDHV
TDLCDLAHAAGAQVYIDGANLNAALGYVRFGDIGGDVSHLNLHKTFAIPHGGGGQGVGPV
AAKAHLARFLPGHPFAPELDHSGASGANYVHSGRAVSAAPFGGASILPISWAYLRMMGLA
GVRRASGSAVLAANYIAERLSGVFPVLYTGEQGLVAHECIFDLRPLHRASGITSIDVAKR
LIDYGFHAPTVNFPVVGTLMVEPTESEDLDELDRFIEAMIMIKAEADEVALGVWPADDNP
IVNAPHTVASVTAPIWDHPYSRRTAAYPVASLEGDKFWSPVRRIDEAYGDRNLACSCPPL
EAFETYEEAPVGDRLLSDGLLSSGLLSVGPALPSAVRALRQESVDLPL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaccaacgattcgccgaccgtcacatcggcaccgacgaagcggctcagctcgcg
atgctcgaggttctcggtcacaacagtctcgacgagctggtgaccgcggccattcccgca
tctgttcgcggcagatccgttcgcgccgggcgtggtctgtcgccctcgactcttgccgaa
actctgagcgaagtgcgtgttgcggccgagttgcgtgagcttgcgtctcgcaacgtcgtc
aaccggtcgatgatcggtctcggcttctacgacaccgcgatgcccgccgtcatccgccgc
accatcttcgagaacccccactggtacacggcatatacgccgtaccagcccgaaatcgcg
caggggaggcttgaagctctgctgaactttcagacgatggtggccgaactgaccgggctc
gacacggccaatgcgtcgatgctcgacgagagcactgccgctgcggaggcgatgctgttg
ctgcgacgcgccagttcgaattcatcgagtgtcttcgtggtcgacgccgatctctttccg
cagaccaagtcggttctcgcggcgcgagcggatgccctgggcatcactcttgtcgaaatc
gatctcgcctcggcgagcaccgccgagctgccgcccgccttcggagtgatcgtgcagtac
ccgggcgcatccgggcgcatctggaatccggccgccctgatcgcgacggcccatctgagg
ggagctcgtgtcgcggtcgcggccgatctcctggcgatgacgctgctcacgccgcccggt
gagctcggggccgacgtggccgtgggctccgcccagcgtttcggcctgccgctcggctac
gggggcccgcacgccggctttctcgccgtgcgggccggtcttgagcggcaactccccggg
cgactcgtcggagtcagtcgagacgccgacggagccgtggcctaccggctcgccctgcag
acgcgcgagcagcacatccgccgtgagaaggcgacctcgaacatctgcacctcggcggtg
ctgcccgccgtgctggcgtcgatgtatgcggtttaccacggcccagaggggctgcgccgc
atcgcgacggaggtgaatcgagctgcccgcttgctggcggcgacgcttaacagcggaggg
cttcgagtgctgtacgacgacttcttcgacacgattcaggtcagcgtgccgaagcgggcc
gtacagctcgccaacgagctccatggccagggttatctcgtgcgcgtggtcgacgacgac
accctcgggttctctgtcgacgagaccaccgacggcgaagacctcgctgcggtgatgagt
gctctcgcgtcggtgtcgaccgtgggggagcgctccgcgcggccggggccgagcatcccg
agctcgctcgaacgaacgagtgcttttctcgagcacccggtgtttcgtcgctaccgttca
gagacggctctgctgcgctacatccgccgcctcggtgccaaggactacgcgctcgacaac
ggaatgattccgctcggctcgtgcaccatgaagctcagcagcgcggtgtcgatggaggca
gcgagcctgccgggctttgcgggcatccaccccttcgcgcccgccgaagatgtgcagggc
tacctgcaactgatcgatcagctcgaggtctggcttgcagagctcacggggtacgactcg
gtttcgctgcaaccgaatgccggcagtcagggtgagctcgccgggctgctggccatccgt
tcatatcacctgcagcgtggcgaggggcggcgtgatgagtgtcttattccgtcgagcgcg
cacggcacgaacgcggcttcggccgttctggccggaatgcgggttgtgctcgtcgactgc
gacgaactcggcaatgtcgacctcgccgacgcacggcagaaaatcgccgatcacgccgac
cggatggcggcgctgatgatcacctacccctcgacacacggcgtcttcgaagatcacgtc
accgatctctgcgatctcgcgcacgccgcgggcgcgcaggtgtacatcgacggcgcgaat
ctcaacgcggccctcgggtacgtcagattcggcgacatcggcggagacgtttcgcatctg
aacctgcacaagaccttcgcgattccgcacggcggaggcgggcagggtgtcgggccggtt
gcggcgaaggcgcacctggcacggttcttgcccgggcatccgttcgctcctgagctcgat
cactccggggcgtcgggtgcgaactatgtgcacagcgggcgcgcggtgtcggcggcaccg
ttcggcggtgccagcattctgccgatcagttgggcgtatctacgaatgatgggcctcgcc
ggcgtgcgacgggcgagcggatccgctgtactggcggcgaactacatcgcagagcggctc
agcggtgtgtttcccgttctgtacacaggggagcagggcttggtcgcgcacgagtgcatc
ttcgacctgcgaccgcttcatcgggcatccggaatcacttcgatcgacgtcgcgaagcgc
ctcatcgactacggctttcacgcacccaccgtcaactttcccgtggtcggcacgctcatg
gtcgaacccaccgagagtgaagacctcgacgagctcgacaggttcatcgaggcgatgatc
atgatcaaagccgaagccgacgaggtggccctcggcgtctggccggccgacgacaatccg
atcgtgaatgccccgcataccgtggcgagtgtgacggcgccgatctgggaccacccgtac
agcaggcgtaccgccgcgtatccggtcgcgtcgctcgagggcgacaagttctggtcaccg
gtgcgccgcatcgacgaggcctacggcgaccgcaatctggcctgttcgtgcccgcctctc
gaggcgttcgagacgtacgaggaagcgcccgtcggcgacagactgctgagcgacggactg
ctgagcagtggactgctgagcgtcgggccggcgttgcctagcgccgtgagagctttacga
caggaatcagtcgatctcccgctgtga
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