Subtercola endophyticus: LQ955_08095
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Entry
LQ955_08095 CDS
T08409
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
suba03009
]
LQ955_08095
Enzymes [BR:
suba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LQ955_08095
Ribosome biogenesis [BR:
suba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LQ955_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
UFS60687
LinkDB
All DBs
Position
complement(1721289..1722173)
Genome browser
AA seq
294 aa
AA seq
DB search
MTSSTDGSTALPDGVRLQKVLASAGVASRRVSEDLITAGRVRVNGEVVRELGRRIDPETD
KVSVDNVAVQLDTTKRYVMLNKPVGIVSSLADQHGRPDLSEYTSQYEERLFNVGRLDAET
SGLLILTNDGELAHVLAHPSFGVMKTYIARVEGRVAPQAIARLTKGVELDDGPIAADKAR
LLDSSASSSLVEVTLHSGRNRIVRRMLEEVGHPVVELVRRQFGPLHLGSLKAGELRDLSR
EELGALLTLSRAAKAPKNDDGAATAPAGEAVDAKPARAATGSTSSPAKGRKARA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttccactgatggcagcacagcgctgcccgacggcgtgcgcctgcagaaggtg
ctcgcctcggccggtgtcgcctcgcgccgcgtctccgaagacctgatcaccgccgggcgc
gttcgcgtgaacggtgaggtcgtgcgtgagctcggccggcgcatcgaccccgaaaccgac
aaggtgtcggtcgacaacgtggcggtgcagctcgacaccacgaagcggtacgtcatgctg
aacaagccggtaggcatcgtgagttcgctcgccgaccagcacggccgccccgacctgtcg
gagtacaccagccagtacgaagagcggttgttcaacgtgggccggctcgacgccgagacc
tcggggttgctgattctcacgaacgacggcgagctggcgcacgttctcgcgcacccctcg
ttcggcgtgatgaagacgtacattgcacgcgtcgaggggcgcgtggccccgcaagcgatc
gcacggctgacaaagggtgtcgagctcgacgacggacctattgccgccgacaaggcgcgg
ctgctcgacagctcggccagcagcagtctcgtcgaggtgaccctgcactcgggccgcaat
cgtattgtgcgtcggatgctcgaggaggtcgggcatccagtcgtcgaacttgttcggcgg
cagttcggcccgctgcacttgggctcgctgaaggcgggcgagcttcgtgacctgagccgc
gaggagctgggcgcgttgctcacgttgtcgcgcgcggcgaaggcgccgaagaacgacgat
ggggccgcgacggcgccggcgggcgaggctgttgacgcgaagccggcgcgagccgcaacc
gggagcacaagctcgcccgcgaaaggcaggaaagcacgtgcctga
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