Subtercola endophyticus: LQ955_08120
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Entry
LQ955_08120 CDS
T08409
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
suba03036
]
LQ955_08120
Chromosome and associated proteins [BR:
suba03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LQ955_08120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
UFS60692
LinkDB
All DBs
Position
complement(1727107..1728258)
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AA seq
383 aa
AA seq
DB search
MAGVPAAAQLMPAGLVDAGQGAAGIHSPSVASSVPASPAIHSPAPASSAIHSLVDGYLRH
LTIERGLSRNTLSAYRRDLGRYEAWLAAQGIDSFEAIGEGEIGAFTRQLTTEVPDASTGV
TAPLAASSVARIVSSVRGLHRFLAEEGQAPVNAAREVKPPKLPSRLPKAISIEQMTALLE
ATGGDEPAALRDRALLELLYATGARVSEVVALNVDDVAAVRGGSGAAGASSAAFAAGSSA
ADADFADAGFVRVLGKGSKQRLVPVGSFARAALDAYLVRVRPLYSARGRSTPALFLGLRG
DRLTRQGAWLIIQAAARRAGLEAHISPHTFRHSFATHLIAGGADVRVVQDLLGHASVTTT
QIYTHVTADTLRDMYQTAHPRAR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtggccggagtaccggcggctgcacaactgatgccggccgggctggtggatgcggggcag
ggggctgcgggcatccattcgccgtcggttgcttcgtcggtacccgcttcgccagcaata
cattccccggcacccgcatcgtcggcaatacattcgctggtcgacgggtacctgcgccac
ctcaccatcgagcgcggactgtctcgcaacaccctgtcggcataccggcgagatctcggg
cggtacgaggcgtggctcgcagctcagggcatcgattcgttcgaggccatcggggagggt
gagatcggtgcgttcacgcggcagctgacgaccgaggtgcccgacgcctcgacgggtgtg
acggctccgctcgcggcatcgtctgtggcgcgaatcgtgtcgtcggtgcgtgggctgcat
cggttcctggccgaagaggggcaagcgccggtcaacgccgcccgcgaggtgaagccgccg
aagctgccgagccgcttgcccaaggcgatttcgatcgagcagatgacggcgctgctcgag
gcgaccgggggagacgagccggcggcgcttcgtgatcgggcgctgctcgagttgttgtac
gcgacgggggcccgggtgtctgaggtggtggcgctgaatgtggatgatgtggccgccgtg
aggggcggctctggtgcggctggcgcatcctctgccgcctttgcggccggctcctctgcc
gccgacgctgacttcgccgacgccggttttgtgcgggttctgggcaagggcagcaaacag
cggctggtgccggtgggcagtttcgcccgcgcggcgctcgacgcgtacctcgtgcgggtg
cgcccgctgtattcggcacgagggcggtcgacgccggcactttttctggggctgcgcggc
gatcggttgactcggcagggggcgtggctgatcatccaggcggcggcacggcgagcgggg
ctcgaggcgcacatctcgccgcacacgtttcggcactcgttcgcgacccacctcatcgcg
ggcggtgcggatgttcgggtcgtccaagacctgctcggccacgcctccgtcaccaccacg
cagatctacacgcacgtgacggccgacaccctgcgcgacatgtaccagacggcgcacccc
cgcgcgcgctga
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