Subtercola endophyticus: LQ955_09485
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Entry
LQ955_09485 CDS
T08409
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
suba
Subtercola endophyticus
Pathway
suba00500
Starch and sucrose metabolism
suba01100
Metabolic pathways
suba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
LQ955_09485 (glgX)
Enzymes [BR:
suba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
LQ955_09485 (glgX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
UFS60938
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All DBs
Position
2018107..2020308
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AA seq
733 aa
AA seq
DB search
MDSWPGSAYPLGATFDGSGTNFAIFSEGAEKVELCLFGEKGAETRILLHEVDAFVWHCYL
PQVQPGQRYGYRVYGPYDPKNGLRFNPNKLLLDPYAKATSGTIDWDQSLFAYNFGDPDSE
NDLDSAKHMMYGVVINPFFDWSGDRALRVPYNETIIYEAHVKGLTELNHEIPKDQRGTYA
GIAHPATIEHLQRLGVTAIELMPVHQFVQDSTLLDKGLHNYWGYNTIGFFAPHSAYSSAG
ERGQQVQEFKGMVKALHAANIEVILDVVYNHTAEGNHLGPTISFRGIDNEAYYRLMDDDK
RYYMDYTGTGNTLNVRHPHSLQLIMDSLRYWVIEMHVDGFRFDLASTLAREFYDVDRLSS
FFELVQQDPVVSQVKLIAEPWDVGPGGYQVGNFPPQWSEWNGKYRDTVRDFWRGEPSTLG
EFASRFTGSSDLYEHSGRRPVASINFVTAHDGFTLADLVSYNEKHNEANGENGNDGESSN
RSWNGGAEGPTDDPAIRALRARQQRNFLATLLLSQGVPMLLHGDELGRTQNGNNNTYAQD
NELSWVHWKRADEPLTEFTSAVMRLRKEHPTFRRSRFFDGRPVRRGRGEPLPDIVWLNPE
AGEMEPEEWDAPLSRSVGVYLNGQGIRGRDYRGERVTDVNFLLYFNADDVEVPFTLPSAE
YGVAWDVVIDTAGQATDEAPSKPADIVTVHPKSMMVLRAHRADVPDPDHSVAASLSSMTG
AVPVIPANRPSAG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggacagctggccaggatccgcctacccgctcggagcgaccttcgacggcagtggtacc
aacttcgcgatcttcagcgagggtgcagagaaggtcgaactgtgcctgttcggcgagaaa
ggcgcagagacccgcattcttctgcacgaggtcgacgcgttcgtctggcactgttacctg
ccgcaggttcagccgggccagcgttacggctaccgcgtctacgggccgtacgacccgaag
aacgggctgcggttcaaccccaacaagctgctgctcgacccgtacgcgaaggccaccagc
ggaaccatcgactgggaccagtcgctgttcgcctacaacttcggcgaccctgacagcgag
aacgacctcgactccgccaagcacatgatgtacggcgtcgtcatcaatccgttcttcgat
tggtcgggcgaccgggcattgcgtgttccctacaacgagaccatcatctacgaggcgcac
gtgaaagggctcaccgagctcaaccacgagattccgaaagaccagcgcggcacctacgcg
ggcatcgcgcaccccgccaccatcgagcacctgcaacggctcggtgtcacggccatcgag
ctcatgccggttcaccagttcgttcaagactcgacgctgctcgacaagggtctgcacaac
tactggggctacaacaccatcgggttcttcgcacctcacagcgcgtattcgtcagccggt
gagcgcggccagcaggtgcaagagttcaagggcatggtcaaggccttacacgcggccaac
atcgaagtcattctcgacgtcgtgtacaaccacaccgccgagggcaaccatctcggcccc
acaatctcgttccgcggcatcgacaacgaggcctactaccgcttgatggatgacgacaag
cggtactacatggactacaccggcacgggcaacaccctcaacgtgcgtcatcctcactcc
ttgcagttgatcatggactcgttacgctactgggtcatcgagatgcacgtcgacggattc
cgcttcgacctcgcctcgaccttggcgcgcgagttctacgacgtcgaccggctgtcgagc
ttcttcgagctcgtgcagcaagacccggtggtctcgcaggtgaagctgatcgccgagcca
tgggacgtcgggcccggcggctaccaggtgggtaacttccctccgcagtggtcggagtgg
aacggcaagtatcgtgacaccgtgcgtgacttctggcgtggcgaaccgtcgacgctgggt
gagttcgcgtcgcggttcacaggctcgagcgacctctacgagcattccggtcgccgccct
gtcgcctcaatcaacttcgtcacggcgcacgacggattcaccctggccgacctggtgtcg
tacaacgagaagcacaatgaggcgaacggcgagaacggcaacgacggcgagtcgagcaac
cgcagctggaacggcggggcggagggtcccaccgacgacccggccatccgggccttgcgc
gcgcgtcagcagcgcaacttcttagcgacgctgttgctctcgcagggtgtgccgatgctg
ctgcacggtgacgaactcgggcgcacccagaacggcaacaacaacacctacgcgcaagac
aacgagctttcgtgggtgcactggaagcgcgccgacgagccgctcaccgagttcacctcg
gccgtgatgcgtctgcgcaaagagcatcccaccttccggcgcagccggttcttcgacggc
cggcccgtgcggcgcgggcgcggcgagccccttcccgacatcgtgtggctgaaccccgag
gcgggcgagatggagccggaagaatgggatgccccgctcagccgttccgtcggtgtctac
ctcaacggtcagggaatccgcggtcgtgactatcgcggcgagcgggtcaccgacgtgaac
ttcttgctctacttcaacgcggacgacgtcgaggttcccttcaccctgcccagcgcagaa
tacggagtcgcgtgggacgtcgtgatcgacacggcgggtcaggcgaccgacgaggcgccc
agcaaaccggcagacatcgtcaccgtgcatccgaagtcgatgatggtgctgcgtgcacat
cgcgccgatgtgccagaccccgatcactcggtcgccgcttcgcttagcagcatgaccggc
gcggttcccgtgattcccgccaaccggccgtcagcgggctga
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