Subtercola endophyticus: LQ955_09830
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Entry
LQ955_09830 CDS
T08409
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
suba
Subtercola endophyticus
Pathway
suba02024
Quorum sensing
suba03060
Protein export
suba03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LQ955_09830 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ955_09830 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ955_09830 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
suba02044
]
LQ955_09830 (ffh)
Enzymes [BR:
suba01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LQ955_09830 (ffh)
Secretion system [BR:
suba02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LQ955_09830 (ffh)
Eukaryotic Sec-SRP protein
LQ955_09830 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
AAA_22
AAA_31
Zeta_toxin
AAA_30
cobW
ArsA_ATPase
MMR_HSR1
AAA_24
APS_kinase
AAA_18
NACHT
AAA_33
ABC_tran
TsaE
AAA_16
NPHP3_N
AAA_5
MobB
nSTAND_NTPase7
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UFS61001
LinkDB
All DBs
Position
complement(2098652..2100238)
Genome browser
AA seq
528 aa
AA seq
DB search
MATFGNLSDRLADTFRNLRTKGKLSPADVDGTVREIRRALLDADVALDVVKDFTGKVRER
ALGDEVNKALNPAQQVVQIVNEELIAILGGEARRINFAKKPPTIIMLAGLQGAGKTTLAG
KLAKWLAKDNHTPLLVAADLQRPNAVQQLQVVGGQAGVAVYAPEPGNGVGNPVKVAKDSI
KWAIDKQYDVVIVDTAGRLGVDADMMKQAADIRKAVQPDEVLFVIDAMIGQDAVATAKAF
QEGVDFTGVVLTKLDGDARGGAALSVASVTGRPIIFASTGESLDDFEPFYPDRMASRILD
LGDILTLIEQAQGAFDEEEAAKVAEKFRTDTFTLEDFLGQMQQLRGAGSIKKMIGMLPGM
GAMKEQLNNFDEREIVRTEAIIQSMTKAERQNPKLLNGSRRVRIARGSGMTVTDVNQLVQ
RFEQAAKMMKTVARGGVPNIPGMGPVPGAGFGGGRGKQLPAKKKGSKSGNPAKRAVENAA
LASGEKVGAGSAETAPKGSGFGLGGRAGLPEGAPSEQELETLQKFLRR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccacttttggaaacctctctgaccgcctcgccgataccttcagaaacctgcgcacc
aagggcaagctcagccccgcagacgtcgacggtactgtgcgcgagatccgtcgtgcgctg
ctcgacgccgacgtcgcgctcgacgtcgtcaaagacttcaccggcaaggtgcgcgagcgt
gccctgggcgacgaggtcaacaaggcgctgaacccggcgcagcaggtcgtgcagatcgtc
aacgaagagctgatcgccattctgggcggcgaggcgcggcgcatcaacttcgccaagaag
ccgccgaccatcatcatgctcgcgggtctgcagggtgccggtaagacgacgctcgccggc
aagctcgcgaagtggctcgccaaagacaaccacaccccgctgctcgtcgcggccgacctg
cagcgcccgaacgccgtgcagcaactgcaggtcgtcggcggccaggccggtgtcgcggtg
tacgcgcccgagcccggcaacggcgtcggaaaccccgtcaaggtcgccaaagactcgatc
aagtgggccatcgacaagcagtacgacgtggtcatcgtcgacaccgccggtcgtctcggt
gtcgatgccgacatgatgaagcaggccgcagacatccgtaaggcggtgcagcccgacgag
gtgctgttcgtcatcgacgccatgatcggtcaagacgcggttgctacggccaaggcgttc
caagagggcgtcgacttcacgggtgttgtgctcaccaagctcgacggtgacgcgcgaggc
ggtgccgcgctctctgtcgcgtcggtgaccggccgccccatcatcttcgcctcgacgggg
gagtccctcgacgacttcgagccgttctaccccgaccgcatggcgtcgcgcattctcgac
ctgggcgacattctcacgctcatcgagcaggcgcagggcgccttcgacgaagaagaagcc
gcgaaggtcgcggagaagttccgcaccgacacgttcaccctcgaagactttctcgggcag
atgcagcagttgcgtggcgcggggtcgatcaagaagatgatcggcatgctgcccggcatg
ggcgccatgaaagagcagctcaacaacttcgacgagcgtgagatcgtgcgcaccgaggcc
atcatccagtcgatgacgaaggccgagcgccagaatcccaagttgctgaacggctcgcgt
cgcgtgcgcatcgcgcgcggttcgggcatgaccgtgaccgatgtgaaccagctcgtgcag
cgcttcgagcaggccgccaagatgatgaagaccgtcgcgcgcggcggggtgccgaacatc
ccgggcatggggccggttcccggcgccggtttcggtggcggtcgcggcaagcagctgccg
gcgaagaagaagggctcgaagtcgggcaacccggcgaagcgtgccgtcgagaacgcggcg
ctggcgtcgggcgagaaggtcggtgctggttcggccgagaccgcaccgaagggctcgggt
ttcggcctcggcggccgcgcgggcctgcctgagggtgccccgagcgagcaagaactcgag
accttgcagaagttcttgcgtcgctag
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