Subtercola endophyticus: LQ955_10435
Help
Entry
LQ955_10435 CDS
T08409
Name
(GenBank) LuxR C-terminal-related transcriptional regulator
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_22
AAA_16
TPR_10
HTH_11
TPR_12
Motif
Other DBs
NCBI-ProteinID:
UFS57480
LinkDB
All DBs
Position
complement(2230662..2232956)
Genome browser
AA seq
764 aa
AA seq
DB search
MPEHVIDRIPLRQRLDAVLSAPLAVVVAQAGSGKSVLLAQWVAGHPELRVVWLALDEADD
DAAHFARRLFAELDGSGRAGNRPAGDGPAGGGRAGSDLDGSTPDFSELAPLVALGDGGLG
QPLIEALTLSLSEVGETVLVLDDLHHLSNQKLLTDLGRFVDSAPPNVHTVVASRSDVGFA
SRHRLRPDHVELRQADLAMSFADSSELLKRVTGRTIGTDSVRALVSRTEGWMAGLLLAGV
TLRTRLDSETFVAAFTGSDRLVADYLGEEVLAALAPQRRQALLRLSLLDTMSVELVGALF
DDADTTSLLAELERSSMFVVALDDRREWFRFHHLFGEMLRYRARAEDPVAERRLVLGAAD
WHLARGETDAAVGYLVRAAEWNRVFDVILAGGSAVFERGEMATVVRWIEQVPASIRATRG
DILVLLGILKGVDGQAVEAEDILRRVVADPTMSAGLVATAQAFLASLAQWRAHPQISMRY
ARQALTMLAELGPTPTPNLLNLSDRRSLETIVLFSGGRAAFLAGEFEQARGWLDRSLVSE
GAAYSLWRISGLGSLALLEAWIGNQTRAERLSREALAIAGQAASLAHPSIADAYLALTLV
TIERGELGRAALLLHEGVARIRANGRTQLEWVAFVLSTMLQQRFAPDALPSPAATDESVA
LDPPAGPAPRVAVDRLAALASERQTVAESRSSQLSVTLADPLTERELEILSCLPTHLTAP
ELAAQFFISVSTVKTHMAHIYAKLGVSSRGAAVRRARELSLLPA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacatgtcatcgaccgtattccgctgcgccagcggctcgatgcggtcttgagc
gcgcccctcgcggtggtggtggcgcaggcgggctccggcaaatccgtgctgctcgcgcag
tgggtggccgggcatccggagctgcgagtggtgtggctcgctctcgacgaggctgacgac
gacgccgctcatttcgcgcgccggctcttcgccgagctcgacggtagcgggcgcgcaggc
aaccggcccgcaggggacgggcccgcaggcggcgggcgcgcaggcagcgatctcgacggc
agcacccccgacttctccgagctggcgcccctcgtggcgctcggcgatggcgggctcggc
cagccgctgatcgaggcgctgacgctctccctgagcgaggtcggcgagacggtacttgtg
ctcgacgatctgcatcacctctcgaatcagaagctgctgaccgatctggggcggttcgtc
gactccgcgccaccgaacgtgcacacggtcgtcgcgtcgcgctctgatgtcggtttcgcc
tcgagacaccggttgcgccctgaccacgtcgaactacggcaggccgacctggcgatgagc
ttcgccgactcgtcagaactgctcaaacgcgtcaccgggcgcaccatcggcaccgacagc
gtgcgtgcgctcgtgagccgcaccgaaggctggatggccggactcttgctcgccggagtc
accctgcgcactcggctcgactccgagaccttcgtcgccgcgttcaccggctccgaccgc
ctggtggccgactacctcggcgaggaggtgctggccgccctcgcgccgcagcgacggcag
gccctgctgcgcctgtcgctgctcgacacgatgagcgtcgaacttgtcggcgctctgttc
gacgacgccgacaccacgagccttctcgccgagctcgaacgtagctcgatgttcgtggtg
gcactggatgaccggcgcgagtggtttcgttttcaccacctgttcggcgagatgctgcgc
taccgcgcgcgggcagaagaccccgtggccgagcggcgactggtgctcggtgccgcggac
tggcacctggcccggggcgagaccgatgcggccgtgggctacctggtgcgtgccgccgag
tggaaccgcgtcttcgacgtgattctcgccggcggctccgcggtgttcgagcgtggtgag
atggccactgtggtgcggtggatcgagcaggtgcccgcgagcatccgcgccacccggggc
gacattctggtgctgctgggcattctgaagggcgtcgacgggcaggcggtcgaggcagaa
gacattctgcgccgggtggtcgccgaccccacgatgtcggcgggcctcgtggccaccgca
caggcttttctcgcctcgctcgcgcagtggcgggcgcatccgcagatctcgatgcgatat
gcacggcaggcgctgacgatgctggccgagctcgggccgacgccgacaccgaacctgttg
aacctgagcgaccggcgttccctcgagacgattgtgctgttctcgggcggtcgggccgcg
tttctcgccggcgagttcgagcaggcccgagggtggctcgatcggagcctcgtaagcgag
ggtgccgcatattcgctctggcgcatcagcggtctcgggtcgctcgcgctgctcgaggcg
tggatcggcaaccagacccgggccgagcggctgagccgagaggcgctcgcgatcgccggc
caggcggcatctctggcgcatccgtcgatcgccgacgcttacctcgcactgacgctcgtc
acgatcgagcgcggtgaactcgggcgggcggcgcttctcttgcacgagggcgtagcccgc
atccgggcgaacgggcgtacgcagctcgagtgggtcgcgttcgtgctgtcgacgatgctg
cagcagcgcttcgctccggatgccctgccctcgcccgccgcaaccgatgagtcggtggcg
ctcgacccgcctgccgggccggcgccgcgtgttgctgtcgatcggctcgcagcgctcgcg
agcgagcgtcagaccgttgcagagtcgcgcagttcgcagctcagcgtcacgctggccgat
ccgttgaccgagcgggagctggagatcctgtcgtgcctgccgactcatctcacagccccc
gaactcgccgcgcagttcttcatctcggtgagcacggtcaagacgcacatggcgcacatc
tacgccaagctcggcgtctcgagtcgcggagccgcggtgcgccgtgcccgggaactctcg
ctgctgccggcgtga
DBGET
integrated database retrieval system
