Subtercola endophyticus: LQ955_10550
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Entry
LQ955_10550 CDS
T08409
Name
(GenBank) iron ABC transporter permease
KO
K23187
iron-siderophore transport system permease protein
Organism
suba
Subtercola endophyticus
Pathway
suba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LQ955_10550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
suba02000
]
LQ955_10550
Transporters [BR:
suba02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Iron-siderophore transporter
LQ955_10550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FecCD
ABC-3
Motif
Other DBs
NCBI-ProteinID:
UFS57501
LinkDB
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Position
2256815..2257978
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AA seq
387 aa
AA seq
DB search
MTGDTVTGNTVTGNTVTGDTVSTKHDIVRSNRGRASTPRGGDGQRMLARHTRGRVLVVTL
VCLLVAIALGLIGIVAGSSSLSVVDVARTLAGGGTHGQQLIVFELRLPRVAGGLLVGAAL
GLAGALTQTFARNPLATPDILGVTSGAALGAVSAIVLVGGSYTVGAGALTLGLPAVATVG
ALVTAAVVYGLSWRGGIDSYRLILIGIGVTATLGGITGYLIARAQITEAASASQWLVGSL
SGISWASVWPVLIALVVVTPLALVQSSNLEVTQLGDDISTGLGVALQRHRLIIIVCAVLL
CAAAVSAAGPIDFVAFVAPQIARRLTRTARPPLLASALLGAIVVVGADALARGVLPGEVP
VGILTAVIGAPYLIWLLTRRSKREAFV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgacactgtgacgggcaacacagtgacgggcaacacagtgacgggcgatacc
gtgagcacaaaacacgacatcgtgcgatcgaaccgcggccgggcatccacaccccggggt
ggcgacggtcagcggatgctcgcgcggcacactcgcggccgagtgctcgttgtcaccctc
gtctgcctgctcgtcgcgatcgcgctcgggctgatcggaatcgtggcgggctcgtcatcg
ctctctgtcgtcgatgtcgctcgcacgttggccggcggcggcacccatggccagcagctg
atcgtcttcgagctgcgacttccgcgcgtcgccggcggactcctcgtcggcgccgccctc
ggcctcgcgggcgcactgacgcagacctttgcgcgcaaccctctcgcgacgcccgacatt
ctcggcgtcacgtcgggtgccgcgctcggcgccgtatcggccatcgtgctggtgggtggc
agctacaccgtcggggccggcgcgctcacgctcggcctgccggcggtggcgacagtgggc
gccctcgtgacggcagcggtcgtgtacggcctgtcgtggcgcggcggaatcgacagctac
cggctgatcttgatcggcatcggcgtcaccgcgacgctcggcggcatcacgggatacctc
atcgcgcgagcacagattacggaggccgcttccgcgtcgcagtggttggtcggcagcctg
tcaggcatctcgtgggcgagcgtctggccggtgctgattgctctcgtggtggtgacaccg
ctggcgctcgtgcagtcatcgaacctcgaggtgacccagctcggtgacgacatctcgacc
ggcctgggtgtcgcccttcaacgccatcggctcatcatcatcgtgtgtgcggtgctgctg
tgcgcagcggcagtctcggccgctggccccatcgacttcgttgcgttcgtcgcacctcag
atcgcacggcggctcacccgcacggcgagaccaccgctgctcgcgtctgcgttgctcggc
gcaatcgtggtggtcggggccgatgcgctggcgcgcggggtgctgcccggtgaagtgccg
gtgggcatcctgaccgccgtgatcggggcgccttacctgatctggttgctgacccgccgt
tcgaagagagaagcattcgtatga
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