Subtercola endophyticus: LQ955_10660
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Entry
LQ955_10660 CDS
T08409
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
TrkA_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
UFS57522
LinkDB
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Position
2276913..2278949
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AA seq
678 aa
AA seq
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MTTESEVHVEYAVLPGRARESALVHVGDPASRKPVIWGSERLASLTAAFDDIEAHEVEAV
VLLGSAHSFGAGADLTALAAARTADDAAELGAEGWSTFRRLTEWDAPSFALITGFALGGA
LELALFADYRLARSDTRAIGLPEVRLGLVPGWGGIHRLARLAGPRVAYDVAVRDSRRGTS
LSADDAARLGIIDQVVPAADWNEQWPAAVAALLPSFTPQRRQRRPSDEEYAAQLETVHSD
FARSRPTVSAAPACAVELLDAAQTETLDEAQAATTAVFAELLLSDAGAASLYAYQLSRSP
GRLPADLAVGSAQPVERAAVIGAGLMASQLATLLVRFGGLPVVLTDLDQARADRGAELVR
SQLATAAEKGQLSETEAARLSALVSASAEPGAIAGADFVIEAIFENMAAKKQALAEAEKH
LAPHALLATNTSSLSISEMADDLQHPERVIGFHIFNPVESVPLVEIIHGRQTDEATVATA
LELAAKLKRQAIVAADSPGFVVNRLLTRLYDVVMTTIDAGGDPLVVDHSIDDLGLPMSPL
RLLDFVGPAIQLHVSETMHDAFPDRFSRLEWLTRVVDGGLRTVLQRDQTLTAEAAALLPA
PDESTTGAELAASVRTGILDALTDEVDRMLAEGVVERAEDIDKAMILGANFPWALGGLTP
YLRSRTENTRKNSEGETR
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggagtccgaggttcacgtcgagtatgcggtactgcccggccgcgccagagag
agcgcactggttcacgtgggcgatcctgccagcagaaagcccgtcatctggggcagcgaa
cgactcgcctcgctcacagcggcattcgatgacatcgaagcgcacgaggtcgaggccgtc
gtgctgctcggcagcgcgcattccttcggcgccggagccgacctcaccgcgctggccgcc
gcgcgaaccgccgacgatgccgcagagctcggggccgaaggctggagtacctttcgccgg
ctgaccgagtgggatgccccgagcttcgccctgatcaccgggttcgctctcggcggcgcc
ctcgaactcgccctgttcgccgactaccgcctggcccgcagcgacacccgcgcgatcgga
cttcccgaggtgcgcctcggcctcgtacccggctggggcggcatccatcgactggctcgg
ctcgccggccctcgcgtcgcctacgacgtagctgtgcgcgactcgcgccgcggaacaagc
ctcagcgctgacgacgccgcccggctcggcatcatcgatcaggtggttccagccgcagac
tggaacgagcagtggccggccgccgtggccgcactgctcccgtcattcaccccgcagcgc
aggcagcggcgaccaagcgatgaggagtacgcggcccagctcgagacggttcacagcgac
ttcgcgcgttcgaggccgaccgtcagcgccgcacccgcttgcgcggtcgagcttctcgac
gcggctcagacagagacgctcgacgaggcccaagccgccaccacggcagtcttcgccgag
ctgctgctcagcgacgccggggcggcaagcctctacgcttaccagctcagccgttcgccg
ggccggcttccggccgacctcgccgtcggctccgctcaacccgtcgagcgcgccgccgtc
atcggcgccggactcatggccagccagctcgccaccctgctggtgcggttcggcggcctg
cccgtcgtgctcaccgacctcgaccaggcgcgcgccgaccggggcgccgagctcgttcgc
agccagctcgccacagcggccgagaagggccagctcagcgagaccgaagccgctcggttg
agtgcgctcgtctccgcgagcgcagagcccggtgctattgccggcgcagacttcgtcatc
gaggcgatcttcgagaacatggccgcgaagaagcaggccctcgccgaggcagagaagcac
cttgcaccccatgcactgctggcgaccaacaccagctcgttgtcgatctccgaaatggcg
gatgatctgcagcaccccgagcgagtcatcggctttcacatcttcaaccccgtcgagagt
gtgccgctggtcgagatcatccacggccgacagaccgacgaagcgaccgtcgccactgcg
ctcgagctcgccgcaaaactcaaacggcaggcgatcgttgcggccgactcccccggattc
gtggtgaatcgtctgctcacgcgcctgtacgacgtggtcatgacgaccatcgacgccggt
ggcgacccgctcgtcgtcgaccacagcatcgacgacctcgggctgccgatgagcccactg
cggctgctcgacttcgtggggcctgccatccagctgcacgtcagcgagacgatgcacgac
gcttttcccgatcggttcagccgcctcgagtggctcacccgcgtggtcgatggtggtctg
cgcactgtgctacagcgcgaccagacgctcaccgccgaggcggcggcgctgctacccgcg
ccagacgaaagcacaaccggcgccgagctggccgcgagcgttcgcacgggcatcctcgac
gccctgaccgacgaggtcgaccgcatgctcgccgaaggcgtggtcgagcgggccgaagac
atcgacaaggccatgattctgggtgcgaactttccgtgggcgctcggcgggctcactccc
tacctgcgcagcagaaccgaaaacacacggaaaaacagtgaaggcgagacccgatga
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