Subtercola endophyticus: LQ955_11500
Help
Entry
LQ955_11500 CDS
T08409
Name
(GenBank) carbohydrate binding domain-containing protein
Organism
suba
Subtercola endophyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_25
CBM_4_9
PilM
Motif
Other DBs
NCBI-ProteinID:
UFS57676
LinkDB
All DBs
Position
2461835..2464363
Genome browser
AA seq
842 aa
AA seq
DB search
MNRLTRNAVAAMAACTALVMAGGLSLDAAVAAPTTATAASSTVQISATPAPAPTPSAASA
PKVAPSPSVTPSASATPPAATAPIAPTPAPPVTSTATATPTPTPTPTSGSASTDVPTDGV
AGDPTLEQMNEAHNHSMGSTISANEPAASGPKTFSRQAQAVPNAATGTATTQGLDISGWQ
PTVDWNTVWANGARFVYIKATESDDYTSSYFANQWAGATNVGMVRGAYHFANPYESSGAT
QASYFVAHGGGWSVDGKTLPPMLDIEYDPYTGSDHTNACYGLSASAMIAWIHDFSNTVRA
KTGTLPMIYTTTGWWRTCTGNSSEFGANPLFIAYWPSSISVGAGTLPAGWSSYAMWQYAD
SGIFPGDQDLFNGSLDALKSFASKGSNGGAVGSLVNGSFENSTTGWFPGNGPVNQLIYTD
PSAAEDGSSFLASNTAVPWHSMAQDVQRTMSVGEQATATVWLRAAWGTFSGQFTLWGIGN
TQESASTPFTVGTTWQQVTVRLPIVSSSHSSLRFEVYMTTTGDTLFLDNAALSFGAAPVA
PVSRPSENLLSNPGFEGQLGGWIPGNGDINRAVWQDASVAHSGTWFGAANTATPAHSLAQ
QVPASPGIGDDYVISIWVRAGGGVNQPFSGRLALWGLGGGANISNGADFTATSQWTQVSV
TLNVTRGDVTVLKPEIYLFTTGINLLVDDASLTHKLLRSGSFEGNSFSGWSTSASTMNWA
LFTGPQTGVTPEDGSYFLASNTSVNGNSLSQQIARTTNVGETYTAEVWVRSFNPNQTFSG
TLALWGLGGATEGTSTDFTASGTWTKVTVTLPITNAGHTQLKFEVYERSTGQLLLLDGAQ
VY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgactcacacgtaatgcggtggccgcgatggcggcgtgcaccgctctcgtgatg
gcgggcggcctctcgctcgacgccgcggtggctgctccgacgacggcgaccgctgcttcg
tcgacggtgcagatctcggccacgccggcaccggcccccacgccctccgccgcgtcggcc
ccgaaggttgcgccttcgccatccgtaaccccctcagcgtcggccacgccgcccgctgcg
acggcgccgatcgcaccgacacccgcacccccggtgacatccacagccacagcgacgccg
acgccgacacccacgccgacgagcggcagtgcatccactgacgtgcccaccgacggcgtc
gcaggcgaccccacgctcgagcagatgaacgaggcgcacaaccactcgatggggtcgacc
atcagcgccaacgagcccgccgcatccgggccgaagaccttctcgcggcaggcccaggcc
gtgcctaacgccgcgactggtaccgcgaccacccagggcctggatatcagcggctggcag
cccacggtcgactggaacaccgtctgggcgaacggggcgcggttcgtctacatcaaggcg
accgagagcgacgactacaccagcagctacttcgcgaaccagtgggccggcgccacgaac
gtcggaatggtacgcggggcctaccacttcgccaacccgtacgagtcgagcggggccacg
caggccagctacttcgtggcgcacggcggtggctggagtgtcgacggcaagacgctgccg
cccatgctcgacatcgaatacgacccctacacgggctccgatcacacaaacgcctgttac
gggctgagcgcgtcggccatgatcgcctggattcacgacttctcgaataccgtgcgagcc
aagacgggcacgttgcccatgatctacaccaccacgggctggtggcgcacctgcaccggc
aactcctcggagttcggcgcgaatccgttgttcatcgcgtattggccgagcagcatctcg
gtcggtgccggaacacttccggccggctggagcagctatgcgatgtggcagtacgccgac
tccggcatctttcccggcgatcaagatctcttcaacggcagcctcgacgcgctgaagtcg
ttcgcctcgaagggctcgaacggcggtgccgtcggcagcctggtgaacggatcgttcgag
aactcgaccacgggctggtttcccggcaacggaccggtgaatcaactgatctacaccgat
ccctccgccgctgaagatggttcgtcgttcttggcgtcgaacacggcggttccctggcac
tccatggcgcaagacgtgcagagaacgatgagcgtcggcgagcaggcaaccgcaacagtc
tggcttcgagcggcatggggcaccttcagcggtcaattcaccctctggggtataggcaac
acccaggagtctgcatcgacgccgttcaccgtcggcaccacctggcagcaggtcactgtg
cggctaccgatcgtgtcgtcgtcgcactcctcactgcgtttcgaggtctacatgacgacc
accggcgacaccctgtttctcgacaacgcggcgctgagcttcggcgccgcaccggtggct
cccgtctcacgcccgtctgagaacctcctctcgaacccaggcttcgagggccagctcggc
ggctggattccgggcaacggcgacatcaaccgggccgtctggcaagacgcctcggtagcg
cattccggcacctggttcggggccgcgaacaccgccacgcccgcgcattcgctcgcccag
caggtgccggcgagccccggcatcggagacgactacgtcatttcgatctgggtgagggcg
ggaggcggcgtcaaccagcccttcagcggtcggctggcgctctggggcctcggcggcggc
gcgaatatctcgaacggcgcagacttcaccgcgacgtcgcagtggacgcaggtgtcggtc
accctgaacgtcacgcgcggcgacgtgaccgtgctgaagcccgagatctatctcttcacc
acgggaatcaacctgctcgtcgacgatgcgtcactgacccacaagctcctgcgatccggg
tcgttcgagggcaattcgttctcgggctggagcaccagcgccagcacgatgaactgggcg
ctcttcacggggccgcagaccggcgtcacgccggaagacggcagctactttctcgccagc
aacacgagcgtgaacggtaactcgctctcacagcagatcgcgcgcaccaccaacgtcggg
gagacgtacaccgcagaggtctgggtgcgatcgttcaacccgaaccagaccttcagtggc
accctggcgctgtgggggctcggcggcgcaactgagggcacctcgaccgacttcaccgcg
agcggcacgtggaccaaagtgaccgtcactcttcccatcacgaatgccgggcacacacag
ctgaagttcgaggtctacgagcggtcgacggggcagctgctgcttctcgacggggcgcag
gtgtactga
DBGET
integrated database retrieval system
