Subtercola endophyticus: LQ955_12135
Help
Entry
LQ955_12135 CDS
T08409
Name
(GenBank) endonuclease/exonuclease/phosphatase family protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
suba
Subtercola endophyticus
Pathway
suba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQ955_12135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_12135
Enzymes [BR:
suba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LQ955_12135
DNA repair and recombination proteins [BR:
suba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LQ955_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFS57795
LinkDB
All DBs
Position
2612674..2613528
Genome browser
AA seq
284 aa
AA seq
DB search
MVSGSKNLRVASVNVNGVRAAFRKGMAGWLDGRGVDILALQEVRASTEDLEELLGPEWNI
LHDAATAKGRAGVAIASRDRANIHRVTIGDEEFDSAGRWLEADYEVNGKIVTVVSAYVHS
GEDGTPKQVEKYKFLDGMTQRLPEIAEHSELAVVVGDLNVGHKTLDIRNWKGNVKRAGFL
PRERAYFDRFFGAAGSTVEGVDGSKGPGLGWVDIGRQQAGEVDGPYTWWSWRGQAFDNDT
GWRIDYQMATPALASRVTAYSVDRAAAHDERWSDHTPVVVDYAI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggtttccggctccaagaatctccgtgtcgcatctgtcaacgtgaatggcgttcgcgcc
gcgttccgtaagggcatggcggggtggctggatggtcggggtgtcgacattctcgcgctg
caggaggtacgggcgtccaccgaagacctcgaagagctgctggggcccgagtggaacatc
ctgcacgacgccgccactgcgaaggggcgcgcaggggtggcgatcgcgtcgcgcgacagg
gcgaacatccaccgcgtcaccatcggcgacgaggagttcgacagcgccgggcgctggctc
gaggccgactacgaggtgaacggaaagatcgtcaccgtggtgagcgcctacgtgcactca
ggtgaagacggcacgccgaagcaggtcgagaagtacaagtttctcgacggcatgactcag
cgccttcccgagatcgccgagcacagcgaactggctgtggtggtcggcgacctcaacgtg
gggcacaagacgctcgacatcagaaactggaagggcaacgtgaagcgcgccgggttcctg
ccccgcgagcgggcgtacttcgaccggttcttcggtgcggccggctcgaccgtcgaaggc
gtcgacggatccaagggccccgggctcggctgggtcgacatcgggcggcagcaggccggt
gaggtcgacgggccgtacacctggtggtcgtggcgcggccaggcgttcgacaacgacacc
ggctggcgcatcgactaccagatggccacgccggcgctggcttcgcgcgtgacggcctac
tcggtcgaccgggcggccgcgcacgacgagcgatggtcggatcacacgcccgtcgtggtg
gattacgccatatag
DBGET
integrated database retrieval system
