Subtercola endophyticus: LQ955_13120
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Entry
LQ955_13120 CDS
T08409
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
suba03000
]
LQ955_13120
Transcription factors [BR:
suba03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LQ955_13120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
HTH_26
HTH_19
Peptidase_M78
ScfRs
KIF21A_2nd
Motif
Other DBs
NCBI-ProteinID:
UFS57962
LinkDB
All DBs
Position
2850799..2852232
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AA seq
477 aa
AA seq
DB search
MPDSLTVGRRIRQLRSDRGLTLDALGSAIGRAASQVSVVENGKRELKLGEMQRFADALNV
TVEQLLSEEAPSERVALEIALTRIQQGQLYSSLGLPAVPPRKTLSDEAIKTILGLHAELE
RMHGERIATPEEARRANTVLRAQMRRRGNYFAELESTAKDLLAAVGHRGGPLSQRVASDL
ASHLGFSLHYVADLPGSTRSITDLANGRIYVPRGQNPDADPRTVLLQALSSHVLGHDTPT
DYAEFLRQRVETNYLAGALLIPEHTAVEFLTAAKAQRELSVEDLRDAFGTTYETAAHRFT
NLATQHLGIPVHFLKVHESGSVVKAYENDDVALPTDALGSVEGMTVCRYWSARQVFDAED
RFSPYHQYTDKPTGTYWCTSRIQSSSRGHFSISVGTAFAEARWFRGRDTTTRFTSTCPDE
SCCRKPPTTLSRKWQSHAWPSAKLNSSLLAALPTGSFAGVDNTEVFEFLERHAPSES
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattcgctcaccgtcggaagacggattcgccagctgcgctcagaccgcggcctc
accctcgacgccctcggctcggcgatcggccgcgccgcctcgcaggtctccgtggtcgag
aacggcaagcgcgaactgaagctcggcgagatgcagcgcttcgccgacgctctcaacgtg
accgtcgagcaactgctcagcgaagaggctccgagcgaacgggtcgcactcgagatcgcg
ctcacgcgcatccagcaaggccagctctactcctcgctcggcctgcccgccgtgccgccc
cgcaagaccctcagcgacgaggcgatcaagacgattctcgggctgcacgctgagctcgaa
cggatgcacggcgaacgcatcgcgacccccgaagaggccaggcgggcgaacacggtgctg
cgcgcccagatgcgcagacgcggcaactacttcgccgaactcgagagcaccgccaaagac
ctgctcgccgccgtggggcatcgcggcgggccgctctcgcagcgcgtcgcctccgatctg
gcttcgcacctcggcttcagcctgcactacgtggcagatctgccggggtcgacgcggtcg
atcaccgacctcgcgaacgggcgcatctatgtgccgcgtgggcagaaccccgacgccgac
ccccgcaccgtgcttctgcaggccctctccagccacgtgctcggccacgacacccccacc
gactacgccgagttcttgaggcagcgggtggagacgaactatctcgcgggtgcgctgctc
atccccgaacacaccgcggtggaattcttgaccgccgcgaaggcgcagcgtgaactgagc
gtcgaagaccttcgtgacgcgttcggcacgacctacgagaccgccgcccatcggttcacc
aacctggcgacgcagcacctgggcattccggtgcatttcttgaaggtgcacgaatcgggc
tcggtcgtgaaggcttacgagaacgacgacgtcgctctgccgacggatgccctgggcagc
gtcgagggcatgacagtgtgccgctactggagtgcccggcaggtgttcgacgccgaagac
cgcttcagcccgtaccaccagtacacggacaagccgacgggtacgtactggtgcacctcg
cgcatccagtcgtcttctcgcgggcacttctcgatcagcgtgggtaccgccttcgccgag
gcgcgctggtttcgcgggcgcgacaccacgacccggttcacgtcgacctgccccgatgag
tcgtgctgccgcaagccgccgacaacgctgtcgcgcaagtggcagagccacgcctggccg
agtgccaagctgaactcgtcgctgctggcggcgctgccgaccggcagcttcgccggggtc
gacaacaccgaggtgttcgagtttctcgagcggcacgcgccgtccgagtcttga
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