Subtercola endophyticus: LQ955_13635
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Entry
LQ955_13635 CDS
T08409
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
suba
Subtercola endophyticus
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
suba03400
]
LQ955_13635
Enzymes [BR:
suba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LQ955_13635
DNA repair and recombination proteins [BR:
suba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LQ955_13635
Prokaryotic type
LQ955_13635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UFS58051
LinkDB
All DBs
Position
2947113..2948492
Genome browser
AA seq
459 aa
AA seq
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MTPSTAGSPTLVWFRDDLRVADHPALHAAVERGERIVCVYVFDEVSEGIRPLGDASKWWL
HHSLVALAGELDARGLALTLRSGPAAEVVAELAAATNAGAVYWNRRYGLAERQLDTALKA
ELKAQGIEARSFQANVLFEPWTLQTGQGQPYRVFTPFWKACLGVPAPRKPLPAPSAETVA
KLGTPGGHPHSERLDDWHLLPEHPDWARGLRDAWQPGEKAAHAQLRDFTAHKLAEYLHDR
DHPAEDATSRMSPRLRWGEMSPFQLWHSVDHQAPGAAGFLRELGWREFAYHLLYNFPEIT
HENMRPAFNAMPWRKPIDDELERWQQGRTGIPLVDAGMRELWQTGVMHNRIRMVAASFLV
KNLLLDWRIGEAWFWDTLVDADPASNAMNWQWVAGSGVDAAPYFRVFNPELQQKKFDPRG
EYVARFVPEYATNEYPAPMVDLGESRKRALAAYDVIRGS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgagcaccgcaggctcgcccacactcgtctggtttcgcgacgatctgcgcgtg
gccgatcatccggccctgcacgcggcggtcgagcgcggcgaacgcatcgtatgcgtctac
gtcttcgacgaagtgagcgagggcatccgcccgctcggcgacgcgtcgaagtggtggttg
caccactcgctcgtggcgcttgcgggcgaactggatgcccggggcctcgccctcacgctg
cgctccggccccgcggccgaggtcgtcgcagaacttgcggcagcaacgaacgccggtgcc
gtgtattggaatcgccgctacggactagccgaacgccagctcgacaccgcactcaaggcc
gagctgaaagcccagggcatcgaagcacgcagctttcaggcgaacgtacttttcgagccg
tggactctgcagaccggccaaggccagccctaccgcgtcttcacgccgttctggaaggcc
tgcctcggcgttccagcgccgcgcaagccgctgccggcgcccagcgccgagacggtggcg
aagctcggaacgccgggcgggcatccgcactccgagcgcctcgacgactggcacctgctc
cccgagcatcctgactgggccaggggcctgcgtgacgcgtggcagccgggcgagaaggcc
gctcacgcccagctgcgtgacttcacggcgcacaagctcgccgagtacctgcacgaccgc
gatcaccccgcagaagacgccacctcgcgaatgtcgccgcggctgcgctggggcgagatg
agcccgttccagctatggcactccgtcgatcatcaggcgcctggcgccgcaggctttctg
cgtgagctcggttggcgtgagttcgcctatcacttgctctacaacttccccgagatcacc
cacgagaacatgcgcccggccttcaacgccatgccgtggcgaaagcccatcgacgacgaa
ctcgagcgctggcagcagggccgcacgggcatcccgctcgtcgacgccggcatgcgcgag
ctctggcagacgggcgtgatgcataaccgcatccgcatggtcgcagcgtcgtttctggtg
aagaacctgctgctcgactggcgcatcggcgaggcctggttctgggacacactggtcgat
gccgaccccgcgagcaacgcgatgaactggcagtgggtggccgggtcgggcgtggatgcc
gcaccctactttcgcgtcttcaaccccgagttgcagcagaagaagttcgacccccgcggc
gagtacgtggcccggttcgtgcccgagtacgcaacgaacgagtaccccgccccgatggtg
gacctcggcgaatcgcgcaagcgcgccctcgcggcctacgacgtgatccgcggatcgtag
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