Subtercola endophyticus: LQ955_14135
Help
Entry
LQ955_14135 CDS
T08409
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
suba
Subtercola endophyticus
Pathway
suba00280
Valine, leucine and isoleucine degradation
suba00650
Butanoate metabolism
suba00907
Pinene, camphor and geraniol degradation
suba01100
Metabolic pathways
suba01120
Microbial metabolism in diverse environments
suba04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
suba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LQ955_14135
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LQ955_14135
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LQ955_14135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LQ955_14135
Enzymes [BR:
suba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LQ955_14135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UFS58146
LinkDB
All DBs
Position
3053440..3054396
Genome browser
AA seq
318 aa
AA seq
DB search
MTSRRPSSVLIREVGPRDGFQNEPEVIPTAEKIRLINALGRAGFSRIEVASFVRPDVIPQ
LSDGVAVLKGIDLPPEVSRMVLIPNSKGLDNALAVREYFDEASIFVSASETHNMKNINRT
VEQTMADDTVMATRILDAGLKLDAVIATSFGCPYEGKVPLDRVLGLAERFAELGATEIGF
GDTTGMANPAYVSDFFEAAFERLPGVELTAHFHNTRGQGLTNAYAALEVGCHSFESSFGE
LGGCPVPAGSTGNIATEDLVSMFEEMGVDTGLDLGLVIDAAREAQTCLGRKLTSHSILAG
PVDWTGTLVSHGTPLEHL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcgcagaccgagcagcgtgctcatcagagaggtcgggcctcgtgatgggttt
cagaacgagcccgaggtcattcccaccgcagagaagatccgcctcatcaatgcgctgggc
cgagccggcttcagccgcatcgaggtggcgagtttcgttcgccccgacgtcatcccgcag
ctctccgacggcgtcgccgtattaaagggaatcgacctgccccccgaggtgtcgcgcatg
gtgctcattccgaacagcaaagggctcgataacgcgctcgccgtgcgcgagtatttcgac
gaggcatccattttcgtcagtgcttcagaaacgcacaacatgaagaacatcaatcgcacg
gtcgagcagaccatggccgacgacacggtgatggccacccgcattctggatgccgggctg
aaactcgacgccgtgatcgccacctcgttcggctgcccctacgaaggaaaggtgccgctc
gaccgggttctcgggctcgccgagcgattcgccgagctgggagcaaccgagatcggcttc
ggcgacaccaccggcatggccaaccccgcctacgtctccgacttcttcgaggcagccttc
gaacgccttccgggcgtcgaactgaccgcgcactttcacaacacgcgcggccagggcctg
acgaacgcctatgcggccctcgaggtgggctgccacagcttcgagtcgagcttcggtgaa
ctgggtggatgcccggttccggccggctcgaccggaaacatcgccaccgaagacctggtc
agcatgttcgaagagatgggcgtcgataccggtcttgacctcggtctcgtcatcgacgca
gcccgcgaggcgcagacctgcctcgggcgaaagctcaccagccactcgattctcgccggg
cccgtcgattggacgggcacgctcgtcagtcacggaacaccactggaacacctctga
DBGET
integrated database retrieval system